Skermania piniformis: KV203_11780
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Entry
KV203_11780 CDS
T07358
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spin
Skermania piniformis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spin03016
]
KV203_11780 (truB)
Enzymes [BR:
spin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KV203_11780 (truB)
Transfer RNA biogenesis [BR:
spin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KV203_11780 (truB)
Prokaryotic type
KV203_11780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QXQ12637
LinkDB
All DBs
Position
complement(2528600..2529490)
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AA seq
296 aa
AA seq
DB search
MSSSTPPGLLIVDKPSGMTSHDVVSRCRRLLGTRKIGHAGTLDPMATGVLVLGVERATKL
LGLLALTTKAYTATIRLGQATSTDDADGELLATTPASGVDEAAITAAVAALTGAIEQVPA
RVSAIKVDGRRAHARARAGEEFVLAARPVTVSRFDVLTRRDVGASIDLDVVVECSSGTYV
RALARDLGAALGVGGHLTALRRTRVGPFTIDQAATLDRVADEPGVSLDIDTAIRAAFPVR
TVDEAETAALQHGRWLDSIGIVGVYAAVDAAGRAQALVEERGRRAAPMFVVRPHGL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttcgacgccgcccggcctgctgatcgtggacaaaccgagtgggatgaccagc
cacgacgtcgtatcgcggtgccgccggttgctgggcacgcgcaagatcgggcatgccggc
acgctggacccgatggcgaccggggtgctggtgctcggtgtcgagcgagccaccaaactg
ctcggtctgctggcgttgaccaccaaggcatacaccgcgaccatccggctcggccaggcc
acgagtaccgacgatgccgacggggagctgctggcgaccacgcccgcatcgggggtcgac
gaggcagcgatcacggccgcggtcgccgcgttgaccggggcgatcgaacaggttccggcg
cgggtgagcgcgatcaaggtggacggcaggcgggcgcacgcccgagcgcgagcgggggag
gagttcgtcctggcggcgcgcccggtgacggtgtctcgattcgacgtgctcacccgacgc
gatgtcggtgcgtcgatcgatctggacgtcgtggtggagtgctcgtccggtacctacgtc
cgggcgctcgcccgggacctcggcgcagcgctcggcgtcggtgggcacctgaccgcgttg
cgtcgcacccgagtcggtccgttcaccatcgatcaggccgccaccctcgaccgggtggcc
gacgagccgggggtcagcctggatatcgacacggcgatccgagccgcgtttccggtacgc
accgtcgacgaggcggagaccgctgccttgcagcacggccggtggctggattcgatcggc
atcgtcggggtgtatgcggcggtggacgccgccggccgagctcaagcattggtggaagag
cggggtcggcgcgcggcgccgatgttcgtggtccggccgcacgggttgtag
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