Skermania pinensis: KV203_12385
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Entry
KV203_12385 CDS
T07358
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spin
Skermania pinensis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spin03032
]
KV203_12385
03036 Chromosome and associated proteins [BR:
spin03036
]
KV203_12385
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_12385
DNA replication proteins [BR:
spin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KV203_12385
Chromosome and associated proteins [BR:
spin03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KV203_12385
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KV203_12385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HC2
Motif
Other DBs
NCBI-ProteinID:
QXQ12735
LinkDB
All DBs
Position
complement(2669650..2670351)
Genome browser
AA seq
233 aa
AA seq
DB search
MNKAELVDLLTEKIGTDRRTATEAVENVVDIIVRAVHKGQSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGKQRLSATGPAVKRGSGTAKPAAKKAAAAK
KTTATARKTAATKATPAKTTRSTAAKATTAATKATPAKTTTARKTAATKATPAKTTTARK
TAATKATPAKTTTARKTAATKATPAKTTRSTAAKATTARKTPAKKTATKRTAK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagccgaactggtcgacctgctcaccgagaaaatcggtacggatcgacgcacg
gcgaccgaagccgtggagaacgtcgtggacatcatcgtccgcgcggtgcacaaggggcag
agcgtcaccatcaccggtttcggcgtgttcgagcagcgtcgccgggccgcccgggtcgcg
cgcaacccgcggacgggcgagacggtcaaggtcaagcccacctcggtgcccgcgttccgg
ccgggcgctcagttcaaggcggtgatcgccggcaagcagcgactttccgcgaccgggccg
gcggtgaagcggggttcgggcacggccaagccggctgcgaagaaggctgcggcggcgaag
aagacgacggcgacggcgcgcaagaccgccgctaccaaggcgaccccggcgaagacgacc
cggtcgacggcggcgaaggccacgaccgctgccaccaaggctacgccggcgaagacgacc
acggcgcgcaagacggccgctaccaaggcgacgccggcgaagacgaccacggcgcgcaag
acggccgctaccaaggcgacgccggcgaagacgaccacggcgcgcaagaccgctgccacc
aaggcgaccccggcgaagacgacccggtcgacggcggcgaaggccacgaccgcgcgcaag
acgcccgccaagaagacggcgaccaagcgcaccgccaagtag
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integrated database retrieval system