Skermania piniformis: KV203_16370
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Entry
KV203_16370 CDS
T07358
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
spin
Skermania piniformis
Pathway
spin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KV203_16370
09124 Replication and repair
03420 Nucleotide excision repair
KV203_16370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spin03021
]
KV203_16370
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_16370
Enzymes [BR:
spin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV203_16370
Transcription machinery [BR:
spin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KV203_16370
DNA repair and recombination proteins [BR:
spin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KV203_16370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXQ13402
LinkDB
All DBs
Position
3527330..3528988
Genome browser
AA seq
552 aa
AA seq
DB search
MNPDPQSGPLIVQSDKTLLLEIDHPGAPAARAAIAPFAELERAPEHVHTYRITPLALWNA
RAAGHDAEQVVDALVRYSRFPVPQPLLVDIVDTIARYGRLQLAKNPAHGLTLISLDRAVL
EEVLRHKKISPMLGARIDDDTVVVHPSERGRLKQMLLKIGWPAEDLAGYVDGEAHPIGLD
FATQPWQLRDYQEMAADSFWAGGSGVIVLPCGAGKTMVGAAAMAKAQATTLILVTNTVAG
RQWRRELIARTSLTDDEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGL
VIYDEVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEA
QGWIAPAECIEVRVTPTEAERMAYATAEPEERYKLCSTVRTKIAVVQSILARHPGAPTLV
IGAYLDQLDELGAALDAPVIQGSTKTKEREALFDAFRIGEIPVLVVSKVANFSIDLPEAS
VAVQVSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVTRDTLDAEYAAHRQRFLAEQGY
AYRIVDADELLA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccccgatccgcaatccggtccgttgatcgtgcagtccgacaagacgctgctgctc
gaaatcgaccatccgggcgcgccggccgcccgggccgcgatcgcaccgttcgcggagctg
gagcgcgcacccgagcacgtgcacacctaccggatcaccccactggcactgtggaacgcc
cgcgccgccggacacgacgccgagcaggtggtggacgcgctggtccgctattcccggttc
ccggtcccccaacccttgctggtcgacatcgtggacacgatcgcccggtacggccggctg
cagctggcgaagaacccggcgcacgggctcaccctgatcagcttggaccgcgcggtgctg
gaggaggtgctgcggcacaagaagatcagcccgatgctcggcgcccgaatcgacgacgac
accgtggtcgtgcatcccagcgaacgcggccgactcaagcagatgctgctcaagatcggc
tggccggccgaagacctggccggctatgtggacggcgaggcgcacccgatcggcctggac
ttcgccacccagccctggcagctgcgcgactatcaggagatggccgccgactcgttctgg
gccggcgggtcgggggtgatcgtgctgccctgcggcgcgggcaagacgatggtcggcgca
gccgcgatggcaaaggcgcaggccacgacgttgatcctggtcaccaacaccgtcgccgga
cggcagtggcggcgcgagctgatcgcccgcacctcgctgaccgacgacgagatcggtgag
tactccggcgagcgcaaggagatccggccggtcaccatcgccacctatcaggtgatcacc
cggcggaccaagggcgagtaccggcatctggagctgttcgattcccgcgactggggtctg
gtgatctacgacgaggtacatctgctcccggcaccggtgttccggatgaccgccgatctg
cagtcgcggcgccggctcggactgaccgcgaccctggtccgcgaggacggccgagaaggc
gacgtcttctcgctgatcggaccgaaacgctacgacgcaccgtggaaggacatcgaggcg
cagggttggatcgccccggccgagtgcatcgaggtccgggtcaccccgaccgaagccgag
cggatggcgtacgcgaccgccgagccggaagagcgctacaagctgtgttccacggtgcgc
accaagatcgcggtggtgcagtcgattctggcccggcacccgggcgcacccaccctggtg
atcggcgcctacctggatcaactcgacgaactcggcgcggcactggacgcgccggtgatc
cagggctcgaccaagaccaaggagcgcgaggcgctgttcgatgcgttccggatcggcgag
attccggtgctggtggtcagcaaagtggcgaacttctccatcgatctgcccgaggcatcg
gtggcggtccaggtgtcgggcaccttcggctcccggcaggaggaggcgcagcgactgggc
cggctgcttcggccgaaacacgacggtggacaggcgcacttctactcggtggtcacccgg
gacacactcgacgccgagtatgccgcccaccggcagcggttcctggccgagcaggggtac
gcctaccggatcgtcgacgcggacgaactgctcgcctga
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