Skermania pinensis: KV203_19005
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Entry
KV203_19005 CDS
T07358
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spin
Skermania pinensis
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spin03032
]
KV203_19005
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_19005
Enzymes [BR:
spin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV203_19005
DNA replication proteins [BR:
spin03032
]
Prokaryotic type
DNA Topoisomerases
KV203_19005
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV203_19005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Cren7
Motif
Other DBs
NCBI-ProteinID:
QXQ13834
LinkDB
All DBs
Position
complement(4126493..4127032)
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AA seq
179 aa
AA seq
DB search
MGLRPGSDKDTGADTDAFGATNLQARHVVEDGDDIRLVFTGKKGVDISLPVTDPETRDVI
RSRLADKSGDDRLFQTNEQGARNYLHSVAPFKLKDLRTYHGIAVAEHTVESMDAPKTKRE
FQTARRRVGEAVAESRNTPTIFRRWEDGIASGKVSKYRSVMPCRSRLLNEGAAVALGCA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgtcccggctcggacaaggataccggggcggacacggacgcattcggggcg
acgaatctgcaagcgcgtcacgtcgtcgaagatggcgacgatatacggctggtctttacc
gggaaaaagggagtcgatatctcgttaccggttaccgaccccgaaacacgagatgtcatt
cgatcacgtctggcagacaagtccggagatgatcgtttgttccaaacaaacgagcagggc
gcgcgaaactatctgcactcggtcgcgcccttcaagttgaaggatctgcggacgtatcac
ggcattgctgtggcggagcacactgtcgagtccatggacgcgcccaaaaccaaacgtgaa
ttccagacagcccgtcgccgagtcggggaagccgttgcagaatcgcgcaacactccgacg
attttccgccgctgggaggacggcattgcgtcaggcaaggtttcaaagtatcgatcggta
atgccgtgccggtcccgattgctcaacgaaggggctgcggtcgcgctgggctgcgcatga
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