Skermania piniformis: KV203_19380
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Entry
KV203_19380 CDS
T07358
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spin
Skermania piniformis
Pathway
spin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV203_19380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spin03019
]
KV203_19380
Enzymes [BR:
spin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KV203_19380
Messenger RNA biogenesis [BR:
spin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KV203_19380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
QXQ16086
LinkDB
All DBs
Position
complement(4207787..4209193)
Genome browser
AA seq
468 aa
AA seq
DB search
MLAAAAVSLRQESAVLAALGSRFAERGHELYLVGGSVRDAVLGRLGADLDFATDARPEQV
QEILRGWVDHQWDTGLAFGTISAAKGAHQIEITTYRSDAYDRTSRNPVVAYGNTLAEDLV
RRDFTVNAMAVRVAGTGAADFVDPLGGLDALLAGVLDTPATPEQSFGDDPLRMLRAARFV
SQLGFEPAPRVRAAMRAMAGEIDRITAERVRAELDKLLLGDYPVEGIDLLVETGLADRVL
PEVPAMRLEIDEHHQHKDVYRHSLTVLTQAIDLEDGDPDLVLRWAALLHDIGKPATRRHE
PGGGVSFHHHEVVGAKQVRTRMRALKYPKQLTEDVSRLVFLHLRFHGYGKGRWTDSAVRR
YVADAGDLLPRLHKLVRADCTTRNKRRAAALQATYSELEARIARLAEQEDLARVRPDLDG
NAIMELLDIPAGPQVGRAWRYLKELRLDRGPLSRDDAEAALLAWWRAQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ctgttggctgcggcggcggtgtcgttgcggcaggaatccgccgtgttggccgcgctgggc
agccggttcgccgagcgcggccatgagctgtacctggtcggcggcagcgttcgcgatgcg
gtgctcggccggctcggtgccgacctcgatttcgccaccgacgcgcgtcccgagcaggtg
caggaaatcctgcgcggctgggtcgaccaccagtgggacaccggcctggcgttcggcacg
atcagcgcggcgaagggcgcccatcagatcgagatcaccacctatcgcagcgacgcctac
gaccggacttcccgcaacccggtggtggcctacggaaacaccctggccgaagatctggtg
cgacgggacttcaccgtgaacgcgatggcggtgcgcgtcgccggcaccggtgccgcggac
ttcgtcgatccgctgggcggcctcgatgccctgttggccggcgtcctggatacgccggcg
acgcccgagcagtcgttcggcgacgacccgttgcggatgctgcgggcggcccggttcgtc
tcccagctcggtttcgagccggcaccgcgggtccgcgccgcgatgcgggcgatggccggc
gagatcgaccggatcaccgccgaacgggtccgggccgagttggacaaactcctcctcggc
gactacccggtggaggggatcgacctgctggtcgagaccggcctggccgaccgcgtgttg
ccggaggtgccggcgatgcgactggagatcgacgaacatcatcagcacaaggacgtgtac
cggcattcgctgaccgtgctgacccaggcgatcgacctggaggacggtgatcccgacctg
gtgctgcggtgggcggccctgctgcacgacatcggcaagcccgccacccgccggcacgag
ccgggcggtggggtgagtttccaccaccacgaggtggtcggggccaagcaggtacgcacc
cggatgcgggcgctgaagtacccgaagcagctcaccgaggacgtgtcccggctggtgttc
ctgcacctgcgattccacggctacggcaagggtcgctggaccgactcggcggtccggcgc
tacgtcgccgacgccggagatctgttgccccggctgcacaagttggtgcgcgccgactgc
accacccgcaacaagcgccgggcggccgccttgcaggccacctactcggagttggaggct
cggatcgcccgcctggccgagcaggaggacctggcccgagtgcgcccggatctggacggc
aacgcgatcatggagctgctcgacatcccggccggcccgcaggtcgggcgggcctggcgg
tacctcaaggagctgcgattggaccgcgggccgctgtctcgggacgacgccgaggcggcg
ttgctggcctggtggcgcgcgcagtag
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