Spirosoma sp. SC4-14: WBJ53_01245
Help
Entry
WBJ53_01245 CDS
T11499
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spio Spirosoma sp. SC4-14
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spio03009
]
WBJ53_01245 (rimO)
Enzymes [BR:
spio01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WBJ53_01245 (rimO)
Ribosome biogenesis [BR:
spio03009
]
Prokaryotic type
ribosomal protein modification factors
WBJ53_01245 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WXC15841
LinkDB
All DBs
Position
complement(304500..305807)
Genome browser
AA seq
435 aa
AA seq
DB search
MKTKGIRTNKINIVTLGCSKNLVDSEVLFTQLKGNGIVVTHEAKKDDANIVVINTCGFID
NAKEESINTILRYVDAKDAGVVDKVYVTGCLSHRYKDELEVEIPTVDAWFGTNEMPRLLK
TLRADYKHELVGERLLTTPSHYAYLKIAEGCDRPCSFCAIPLMRGGHVSRPIDELITEAR
SLARRGTKELILIAQDLTYYGLDLYKKRNLADLINQLADVEGIDWIRLQYAYPSGFPMDV
LDMMRNRPNVCHYLDMPLQTGSTELLKIMRRGITREKTEALIQSIREKVPNITLRTTLIV
GHPGETDAMFNETYEFVERMRFDRMGVFTYSHEENTHSFSMPDDIPADVKQERADELMEL
QQGISQELNQQKVGQTCKVLFDRKEGGYFIGRTEADSPEVDNEVLVPATQYVRLGDFANV
RIDRAEDFDLYGTVM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgaaaggaatacgtaccaataaaatcaacatcgttacgctgggatgctcgaag
aatctggtcgattcggaagtgctatttacgcaactgaagggcaatggcatagtcgtaacc
catgaagcaaagaaagacgacgccaatatagttgttattaacacttgtggcttcatcgac
aacgctaaagaagaatccatcaataccattctccgctacgtcgacgccaaagatgcgggt
gttgttgataaggtatacgtaacaggctgcctttcgcatcgctacaaggacgaactggaa
gtagagattccgaccgtcgatgcctggttcggtaccaacgaaatgccccgattattgaaa
acgcttcgtgctgattataaacatgaactggttggtgaacgcttgctaacaacaccgtcg
cactatgcctacctgaaaattgccgaaggctgcgaccgcccatgttcgttctgtgcgatt
ccgctaatgcggggcggtcatgtgtcgcgcccaattgatgaattgattactgaagcgcgc
tcactggctcgtcgcggcaccaaagaacttattctgattgcgcaggacctgacctattac
ggcctcgatttatataaaaaacgaaatctggccgacctcatcaatcaactggccgatgta
gaaggtattgactggattcggctccaatacgcctatccatcgggatttccaatggatgtg
ctggatatgatgcgcaaccgcccaaacgtttgccattatcttgatatgccgctacaaacc
ggctccactgaattattaaaaattatgcgtcggggcatcacccgcgagaaaacagaagcc
ctgattcagagcattcgcgaaaaagtccccaatattaccctccgtacaactcttattgtt
ggccatcctggcgaaaccgatgccatgttcaacgaaacctacgagtttgttgagcggatg
cgtttcgaccgtatgggcgtgtttacctactcgcatgaagaaaacacacattcgttttcg
atgcccgacgatattccagccgacgtgaaacaggaacgtgcggatgaactgatggagtta
caacaggggatatcgcaggaactgaaccagcagaaagttgggcaaacctgcaaagtgcta
ttcgaccggaaagaaggcggctattttattggccgtaccgaagccgactcacccgaagtt
gataatgaagtgctggtaccggcaactcagtatgtgcgcttgggcgattttgccaacgtt
cgcatcgaccgggccgaagattttgatttatatggtacggttatgtaa
DBGET
integrated database retrieval system
