Spirosoma sp. SC4-14: WBJ53_02840
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Entry
WBJ53_02840 CDS
T11499
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00071
Fatty acid degradation
spio00280
Valine, leucine and isoleucine degradation
spio00310
Lysine degradation
spio00362
Benzoate degradation
spio00380
Tryptophan metabolism
spio00410
beta-Alanine metabolism
spio00640
Propanoate metabolism
spio00650
Butanoate metabolism
spio00907
Pinene, camphor and geraniol degradation
spio00930
Caprolactam degradation
spio01100
Metabolic pathways
spio01110
Biosynthesis of secondary metabolites
spio01120
Microbial metabolism in diverse environments
spio01200
Carbon metabolism
spio01212
Fatty acid metabolism
Module
spio_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
WBJ53_02840
00650 Butanoate metabolism
WBJ53_02840
09103 Lipid metabolism
00071 Fatty acid degradation
WBJ53_02840
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
WBJ53_02840
00310 Lysine degradation
WBJ53_02840
00380 Tryptophan metabolism
WBJ53_02840
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
WBJ53_02840
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
WBJ53_02840
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
WBJ53_02840
00930 Caprolactam degradation
WBJ53_02840
Enzymes [BR:
spio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
WBJ53_02840
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
WBJ53_02840
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
WBJ53_02840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
2-Hacid_dh_C
DAO
Motif
Other DBs
NCBI-ProteinID:
WXC16148
LinkDB
All DBs
Position
complement(668852..671026)
Genome browser
AA seq
724 aa
AA seq
DB search
MINYSIDNNVAIISWEMTSAPMNVLNDESIPQFEAALQKAFADDSVQGIIITSAKPEFVA
GADLKMILRNNDKDPAEMLKVSAELNRIFRRIETSGKPTVAAINGTALGGGYEICLACHH
RVALNNPKTLIGLVEVTIGLLPGAGGTQRLPRMIGIQAALSLILEGKKVGVQEAKTLGMI
DEIADTPADLLTKAKNWIAANPKPLKPWDEIDRKTGKIVGKDNFKVPGGNVQSVTGAQAF
SVGTAMMMDKTKGNYPAPLEIMACVYEGLQVNIDRALTIEARHFVNVATSKVAKNLIQTM
FLGLNEANKGASRPKDVPKTDVKKLGILGAGMMGAGIAYVSAQAGIEVVLKDVSIEAAEK
GKDYSRSLLKKGVERGKVDPLKVDGILNLIKPTADAQDLQGCDLIIEAVFEKRELKAQVT
TEAEPMLAPDTGVFGSNTSTLPISGLAQAAAKPENFIGIHFFSPVDKMMLVEIIMGKQTS
NYALAVAIDYTRKIRKTPIVVNDSRGFYTSRCFGTYSSEGMELLKDGVSPILIENAGKDA
GMPVGPLAVTDEVALDLVYKIAAQGVSDGAIGEADTSYQVSRQFVELGRLGKKAKAGFYD
YPEGQPKSLWAGLADLYPQTDNQPTLDEVKTRLLYRQAIEAVRCFEEKVVRTKLDADLGS
ILGWGFPAYTGGALSFADFVGVDTFVQTLDRLADQYGERFRPTELLRERANMQMSMGRVI
DARV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgattaactatagtatcgataacaacgtggccatcatttcgtgggaaatgacgtcggcc
ccgatgaacgttctcaacgacgaatcgatcccgcagtttgaagcggctctacagaaagca
ttcgccgatgattccgtgcaaggtatcattatcacatcagctaaacccgaatttgtggcg
ggtgccgatctgaaaatgattttgcgcaacaacgataaagatccggccgaaatgctaaag
gtttcggccgaactgaaccgcatttttcggcgcatcgaaacatcgggaaaaccaaccgtt
gcggccatcaacggtacggctcttggtggaggctacgaaatttgtctggcctgtcatcat
cgagtcgctctcaacaatcctaaaacgttaatcgggctggttgaagtaaccatcggtctg
ttgcccggtgctggtggtacacaacgcttaccacgcatgattggtattcaggcagctttg
tcgctcattctggaagggaaaaaagtgggtgttcaggaagccaaaaccctgggtatgatc
gacgagattgccgatacgcccgccgatctgctgacaaaagccaaaaactggattgccgct
aaccccaaaccactgaaaccctgggacgaaattgaccgtaagactggcaaaattgttggg
aaagataatttcaaggtgccgggcggtaacgtgcagagtgttacgggtgcccaggcgttc
agtgtcggtacggccatgatgatggataagacgaaaggcaattatccggccccactcgaa
attatggcctgtgtatatgaagggttgcaggtcaatattgaccgggcgctgactatcgaa
gcgcgccattttgtgaacgtcgcaacgtcgaaagtggccaaaaatctgatccagactatg
tttctgggcctgaacgaagccaacaaaggcgccagtcggccaaaagatgttccgaagacc
gatgtcaaaaaactaggcatattgggtgcgggtatgatgggcgcgggtattgcctatgtg
tcggcgcaggccggcattgaggtcgttctgaaagatgtgtcgatcgaagcagccgaaaaa
ggtaaggattactcgcgcagtttgctaaaaaaaggtgtcgaacgcggtaaagtagaccca
ctcaaggtcgacggcattctcaacctcattaaaccgaccgccgatgcccaggacctacag
ggctgcgacctaataattgaagcggttttcgaaaaacgggaactcaaagcacaggtcaca
acagaagccgagccgatgttagcgccagatacaggtgtttttggttctaatacctcaacg
cttccaatcagcggcctcgcccaggcagccgctaaacccgaaaactttatcggtattcac
ttcttctcgcccgtcgacaagatgatgcttgtggaaatcatcatgggcaaacaaacctcc
aactacgccctggcagtggctatcgactatacacgcaagattcggaaaacgccgattgtg
gtgaacgattcccgtgggttctatacatcacgttgcttcggcacctattcgtcggaaggt
atggagttgctgaaagacggcgttagcccaattctgatcgaaaatgcgggaaaagatgct
ggtatgcccgttggccctctggccgtaactgacgaagtagctcttgatctggtctataaa
attgcggcccagggcgtcagtgatggggctatcggcgaagcggataccagctatcaggtt
tcccggcagtttgttgaactgggtcggttaggcaaaaaagcgaaagcaggtttttatgat
tatccagagggccagccgaaaagcctgtgggctggtttagccgatttgtatccccaaaca
gataatcaaccaacactcgatgaagtgaaaacacggctgctgtatcggcaggccattgaa
gcggttcgttgttttgaagaaaaggtcgtccgcacaaagctggatgccgacctgggctcg
attctgggctggggttttccggcttataccggaggagccttgtcgtttgccgacttcgta
ggcgtcgacaccttcgttcaaacgctcgaccgattagccgatcagtacggcgaacgcttc
cgcccaaccgaactgctacgggagcgagccaatatgcaaatgagtatgggccgcgtcata
gacgcgagggtataa
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