Spirosoma sp. SC4-14: WBJ53_10620
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Entry
WBJ53_10620 CDS
T11499
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
spio Spirosoma sp. SC4-14
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Paralog
GFIT
Motif
Pfam:
LysM
SLT
LysM1_NFP_LYK
LysM_MltD
Ntox11
Motif
Other DBs
NCBI-ProteinID:
WXC17662
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Position
complement(2623918..2626305)
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AA seq
795 aa
AA seq
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MTKQAAVAVRFMKKQTYSLTLLLTLISLIVSAQTSVPLVPEQLTFADISVRLDPDARRIV
QQDVNALLANRQYWTAKLDRVALYFPMIEAILIDEDVPTDFKYLAVQESSLTPDAVSASA
AVGYWQFKRETATSHGMRVDDEIDERKSITASTHGAAKYLKKSNAQFNNWVASLYSYYLG
AGGIAKLIPPDWSYAREVALDGRTDRYILRFFAHKVAIENALKFHQSGNQFALIEYANGG
GKSMRTIADELGVDEFELRKYNRWVLGESVPTDKAYVMAIPVGNNQINDVRQKIASSTSQ
KPQDYAQNDVGFPVLRRVTTGLSSKNEPVLYEINGLPGIQAQAGDNSASLARKAKISLSS
FLRYNDMGERDPIIVGDVYYLAKKMKKALVPFHTVRPDETTRSISQRYGIRLKKLMRYNR
IDRLQKLTVGRVMWLRERRPANKPIEIINAPTAPVYDQTPTPPTRSDATVADRSSTGSPR
TVSGMDNIPRNPSERKKYQPKLVGGGVTPNDGTSEPATTPAPEPTRTTTSPSVEVPTTPA
PDNRPATTSSNRSTTDDGTQRVVIVRSSDPSEAPRTVPVATAPEREKAPAPKKPADTYAS
SRPVKTSSVSQPDRNYEGPSEQQADGSITDVSSVPSRSGSPAVVKNNPRSASSGNKPLPE
PVKPSPSAVSRGAAISGSASRSAATHTVEAGQTYYSISKMYDLSVDELLALNNLTTNDVL
EVGQKLTVKAGNGQAQTAPRTDSPQQGSVTYHTVAKGETMFRISKQYGVTIEQIQEWNNL
SDVGVKEGQKIKIMK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacaagccgccgtagcggtacgatttatgaaaaaacagacgtactctctaacc
ctcttacttactctaatcagtctgatcgtatcggcacagacgtcggtgcccctagtgccc
gaacagctaacgtttgctgatatttcggtccggctcgaccccgatgcccgccgtattgtt
cagcaggatgtgaatgcactactggccaatcggcagtattggacagccaaactcgatcgg
gtggcgctctatttcccgatgatcgaagccattctgattgacgaagatgtgccgaccgat
ttcaaatacctcgcggttcaggaaagttcgctcacaccggatgcggtatcggcttcggca
gctgtcggctactggcagttcaagcgcgaaacagccaccagccatggtatgcgtgttgat
gatgagattgacgaacggaaaagcattaccgcatcaacgcacggagcggccaaatacctg
aaaaaaagtaatgctcagtttaataactgggtagcgtcgctttattcctactaccttgga
gcaggcggcattgccaaactgattcctcccgactggtcgtatgcccgcgaagtagctctc
gatggccgaacagaccgctatattctgcggttttttgcccacaaggttgccatcgaaaat
gcactcaaatttcatcagtctggcaaccagttcgccctgatcgaatatgccaatggtggt
ggcaaaagcatgcgcaccattgccgacgaattaggggtagatgaatttgagcttcgtaaa
tataaccgctgggtattgggcgaaagcgttccgacagataaggcgtatgtaatggctatt
cccgttggtaataaccaaatcaacgatgttcgtcagaaaattgccagcagtacctctcag
aaacctcaggattacgcccagaacgatgtagggtttccggtattacgccgggtaacaaca
gggttgagcagcaaaaacgaacccgttctgtatgaaattaacgggctgcccggaattcag
gcccaggccggcgacaatagtgcttcgctggcccgaaaggcaaaaatcagtctgtcgagt
ttcctgcgctacaatgatatgggcgaacgcgacccgattattgttggggatgtgtattat
ctggccaagaaaatgaagaaagcgctggtgccctttcacacggttcggcccgatgaaaca
acccgaagtatttcgcaacgctatggtatccggctcaaaaaactgatgcgctacaatcgt
atcgatcgattgcaaaaactaaccgttggtcgggtaatgtggttgcgcgaacgtcggcct
gccaacaagccaattgagatcatcaatgcgccaaccgcccccgtttacgaccaaacgcct
acccctcctacccgttccgacgctacagtagccgaccgcagctcaacaggatcgccccga
acggtaagcgggatggacaatattccccgtaatccttcagaacgcaaaaaataccagcct
aaactcgttggtggtggcgtaacacccaatgacggcacatcggaacccgcaacgacgccc
gctcctgaaccaacccgtacgaccaccagcccctcggttgaagtgccgaccactccggca
cccgataatcgtccggccacaacgagcagcaatcgctcaacaactgacgatggcacacag
cgcgttgttattgttcgctccagcgatccctcagaagcaccacgaactgttccggtagct
actgctcccgagcgcgaaaaagcgcctgcgcctaaaaaaccagccgatacgtatgccagc
agccgcccagtcaaaacgtcttcggtttctcaacccgatcggaactacgaaggccctagc
gagcagcaggccgatggcagcataaccgacgtatcgtccgttccgagccggtcgggtagc
ccagccgtagttaaaaacaatccgcggtctgcttcatcgggcaataagcccttgcccgaa
cccgtcaaaccctcgccatctgccgttagccggggggctgccatcagcggttctgccagt
cgctcagccgcaacacacaccgtagaagccggtcagacatattatagtatttcaaaaatg
tatgacctaagtgtcgatgaactgcttgccctcaataatctgacaacgaacgatgtgctc
gaagtggggcagaaattaacggtaaaagcaggcaatggccaggcccagaccgcgccacgc
accgatagtcctcaacagggatcggtaacttaccatactgtggctaagggtgaaacgatg
ttccgcatttcaaaacagtatggcgtaaccatcgaacaaattcaggaatggaataatctt
agtgacgttggggtaaaagaaggccagaaaatcaagatcatgaagtaa
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