Spirosoma sp. SC4-14: WBJ53_12200
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Entry
WBJ53_12200 CDS
T11499
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
spio Spirosoma sp. SC4-14
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spio03009
]
WBJ53_12200
Enzymes [BR:
spio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
WBJ53_12200
Ribosome biogenesis [BR:
spio03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WBJ53_12200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WXC17966
LinkDB
All DBs
Position
complement(3029429..3030463)
Genome browser
AA seq
344 aa
AA seq
DB search
MVAETEDELPEDDELYEHHRIVVDKGQSLLRIDRFLMDRLQNATRTKIQAAIDVESVRVN
GKPTKASYKIKPSDIITVSLPHPPRDTDIKPENIPLTIVFEDDELLVLNKPAGMVVHPAH
GNWDGTLVNALVFHFQNLPTSRNGEIRPGLVHRIDKDTSGLMVIAKTEYAMTHLARQFFD
HSIERTYTALVWGIPEPAAGTITGYIGRSMKDRKVQVIYDDETKGKWAVTHYKTLETLRY
VALVQCNLETGRTHQIRAHMKHIGHPLFNDAMYGGDRILRGNPVGSYKAFVENAFKLLPR
QALHAKSLGFVHPRTREWLQFDSDLPDDFRSVLEKWQKKILNED
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggaaacggaagacgaattacccgaagacgacgaattatacgagcatcaccgc
attgttgtcgataaaggacagagcctgctgcggatcgaccggttcctgatggatcggctc
cagaatgccacgcgcacgaaaattcaggctgctatcgatgtcgagtcggtgcgcgttaac
ggcaagccaactaaagccagctataaaatcaagccttcggatattattacggtatcgctg
ccgcaccccccgcgcgacaccgatattaagccggagaatattccgctgaccatcgttttc
gaagacgacgaactgctggtgctcaacaaaccggcgggcatggtggtccacccggcgcat
ggcaactgggatggtacgctggtcaacgcgctggtctttcattttcagaatctgcccact
tcgcgcaacggcgaaatccgacctggactagtacaccgaatcgataaagatacatcgggc
ctgatggtgattgccaaaaccgaatatgccatgacccacctggcccggcaatttttcgac
cacagtatcgaacggacctatacggcgctggtatggggaattcccgaacctgccgccgga
accattacaggttatattggtcgcagtatgaaagaccgaaaagtgcaggtcatctacgac
gacgaaaccaagggcaagtgggccgtaacgcactacaaaacgctggaaacgttacgctac
gtagccttggtacaatgtaatctggaaacgggccgcacccaccagattcgggcccacatg
aagcatattggccatccgctgttcaacgatgccatgtatggcggtgatcggattttgcgg
ggcaatcccgtaggtagctataaagccttcgttgaaaacgcatttaagttattgccccgg
caggcgctacacgccaaatcgttggggtttgtgcatccacgcacccgcgaatggctccag
ttcgactcggatctccccgacgattttcggtctgttctggaaaaatggcaaaagaagata
ctcaacgaagattga
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