Spirosoma sp. SC4-14: WBJ53_13315
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Entry
WBJ53_13315 CDS
T11499
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WBJ53_13315 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spio03019
]
WBJ53_13315 (groL)
03110 Chaperones and folding catalysts [BR:
spio03110
]
WBJ53_13315 (groL)
03029 Mitochondrial biogenesis [BR:
spio03029
]
WBJ53_13315 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spio04147
]
WBJ53_13315 (groL)
Enzymes [BR:
spio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
WBJ53_13315 (groL)
Messenger RNA biogenesis [BR:
spio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WBJ53_13315 (groL)
Chaperones and folding catalysts [BR:
spio03110
]
Heat shock proteins
HSP60 / Chaperonin
WBJ53_13315 (groL)
Mitochondrial biogenesis [BR:
spio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
WBJ53_13315 (groL)
Exosome [BR:
spio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
WBJ53_13315 (groL)
Exosomal proteins of other body fluids (saliva and urine)
WBJ53_13315 (groL)
Exosomal proteins of breast cancer cells
WBJ53_13315 (groL)
Exosomal proteins of colorectal cancer cells
WBJ53_13315 (groL)
Exosomal proteins of bladder cancer cells
WBJ53_13315 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
WXC18186
LinkDB
All DBs
Position
complement(3299679..3301319)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKKIFFDTEARERIKKGVDTLADAVKVTLGPKGRNVILDKKFGSPAITKDGVTVAKEIE
LKDAMENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGAKNVAAGANPMDLKRGIE
KAVAAVTANLAEQAQTVGDDFGKIAQVATISANHDDEIGNMIAEAMKKVGKEGVITVEEA
RGTETEVKTVEGMQFDRGYLSPYFVTNTEKMEVELDRPFILISEKKVSSMKELLPVLEQV
AQTGRPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEERGFKLENATIDYLGQAEKILIDKDNTTVVNGVGQKEDITGRVNQIKAQIENTTSDY
DREKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVTGGGIALI
RAISALDGINTINEDEKTGVNIIRVALESPLRTIVANAGGEGSVIVNKVKEGTGGFGYNA
KNDTFEDLFAAGIIDPKKVTRLALENAASIAGLLLTTECVIADEPEEAPAGGGAPGMHGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaatatttttcgatactgaagcccgtgagcggattaaaaagggtgttgat
accctggctgatgcggtaaaagttaccctcggccctaaaggtcgcaatgttattcttgat
aaaaaattcggctcaccagccatcaccaaagatggtgtgacggtagcgaaagaaattgag
ctgaaagacgccatggaaaacatgggcgcccagcttgttaaagaagtagcatcgaaaacc
gcggattcggcgggtgatggtacaaccacagcaacggttctggcacaagcaatttactcg
atcggtgctaaaaacgtagccgctggtgctaacccaatggacctgaagcgtggtatcgaa
aaagctgttgctgctgtaactgccaatctggctgagcaggcacagaccgttggcgacgac
ttcggcaaaattgctcaggtagctaccatctcagctaaccacgacgatgaaatcggcaac
atgattgccgaagccatgaagaaagtaggtaaagaaggtgtaattacggttgaagaagct
cgtggtactgaaacggaagttaaaaccgtagagggtatgcagttcgaccgtggctacctg
tcgccttacttcgttactaacaccgaaaaaatggaagttgagctggatcgtccgttcatt
ctgatttcggagaaaaaagtatcgtcgatgaaagagctgctgcccgttctggagcaggtt
gctcaaaccggtcgtccactgctgatcatcgctgaagatgttgatggcgaggctcttgct
acattagtagttaacaaaatccgtggtgctttgaaagtagctgccgttaaagctcctggc
tttggcgatcgtcggaaagcgatgctggaagatatcgctatcctgaccggcggtcaggtt
atcagcgaagagcgtggcttcaaactcgaaaacgctacgatcgactatctgggtcaagcc
gaaaaaattctgatcgacaaagacaacacgactgttgttaatggcgtaggtcagaaagaa
gatatcacgggtcgcgtgaatcaaattaaagcccaaatcgaaaacacgacatcagactac
gatcgcgagaaattgcaggagcgtctggcaaaattgtcgggtggtgtggctatcctctac
atcggtgcggctaccgaagtagaaatgaaagaaaagaaagaccgcgttgacgatgcattg
cacgctacccgcgctgctgtagaagaaggtatcgtaactggtggtggtattgccctgatc
cgtgccatttcggctctggatggcatcaacacgatcaacgaagacgagaaaacgggtgta
aacatcattcgtgttgcgcttgagtcgccacttcgtaccattgttgccaatgctggtggc
gaaggttcagtgattgtaaataaagtgaaagaaggtacgggtggttttggctacaacgcg
aaaaacgatacgtttgaagatctgttcgctgctggtatcatcgatccgaaaaaagttact
cgcctggcactggaaaacgcagcttcgattgcgggtctgttgctgacgaccgagtgtgtt
attgcggatgagccagaagaagcgcctgctggtggcggtgctcctggtatgcacggcggt
ggcatgggtggcatgatgtaa
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