Spirosoma sp. SC4-14: WBJ53_15665
Help
Entry
WBJ53_15665 CDS
T11499
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio03030
DNA replication
spio03430
Mismatch repair
spio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WBJ53_15665 (holA)
03430 Mismatch repair
WBJ53_15665 (holA)
03440 Homologous recombination
WBJ53_15665 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spio03032
]
WBJ53_15665 (holA)
03400 DNA repair and recombination proteins [BR:
spio03400
]
WBJ53_15665 (holA)
Enzymes [BR:
spio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WBJ53_15665 (holA)
DNA replication proteins [BR:
spio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WBJ53_15665 (holA)
DNA repair and recombination proteins [BR:
spio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WBJ53_15665 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Apo-VLDL-II
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WXC18645
LinkDB
All DBs
Position
3828000..3829034
Genome browser
AA seq
344 aa
AA seq
DB search
MIPAVDALLKDIRNKRIAPVYLIHGDEPFYLDRIAEELEKIAIPVAERGFNQFILFGKDT
DVGAVLNYARRYPFMAERQLVIVKEAQQMGGITDKSALTLLEDYALNPLDSTILMICYTR
EEGKPALDERKSWVKAFGAKGKLLGIKKLYDDKIPDWVGMYCREQGAKVSPKACQLLADH
IGNDLKRLAGEIDKILINLHVGEEISATTVERLVGISKEYNVFELQKALAQRDIVKANQI
VAYFGHNPKDNPLVVILAQLFSYFSKVLLVQASKDQTDKGLAPLLGVNPFFVKDYLSAAR
TFPLPKVADILHAIRRADARSKGIDTPTMNEGDILRELVFEVLH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgattcctgccgttgatgcgctgctgaaagacatccgtaacaagcggattgctcctgtt
tatctgattcatggcgatgaaccattttatctggaccgtatagctgaagaactcgaaaaa
attgctattccggttgccgagcgtggatttaaccagtttatactattcgggaaagatacc
gatgtgggggctgtgctgaattacgcccggcggtatccgtttatggccgaacgacaattg
gttatcgtgaaagaagcccagcaaatgggcggtattaccgataaatcggccttaacactg
ctcgaagactacgctctgaatccgctcgatagtacgattctgatgatctgttatacgcgg
gaagagggtaagccagccctcgacgaacggaaatcgtgggtaaaagccttcggtgccaaa
gggaaactgctgggtatcaaaaaactgtatgacgataaaattcccgattgggttgggatg
tactgccgggagcaaggcgcaaaggtgagtccgaaagcctgtcaactgctggccgaccat
atcggaaacgatctgaaacggttggcgggtgaaatcgataaaattctgattaacctacac
gttggcgaagaaatttcggcaacaaccgtcgaacggctggtgggtatcagtaaggaatat
aatgtatttgaactgcaaaaggcgctggctcagcgcgatattgtaaaggctaaccagatt
gttgcgtatttcggccataatccgaaagacaatccactggttgtcattctggcccagctc
tttagttatttcagtaaagtattgctggtgcaggcatcgaaagaccagaccgataaaggg
ctggctcccttgttaggggtcaatccttttttcgtcaaagactacctgtcagccgctcga
acttttcccttgcccaaggttgccgatattcttcatgccatccgtcgggccgatgcccgt
agtaagggcatcgatacaccaaccatgaatgaaggcgatatcctgcgtgaactagtgttt
gaggtgttacactaa
DBGET
integrated database retrieval system
