Spirosoma sp. SC4-14: WBJ53_16835
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Entry
WBJ53_16835 CDS
T11499
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio03030
DNA replication
spio03430
Mismatch repair
spio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WBJ53_16835
03430 Mismatch repair
WBJ53_16835
03440 Homologous recombination
WBJ53_16835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spio03032
]
WBJ53_16835
03400 DNA repair and recombination proteins [BR:
spio03400
]
WBJ53_16835
Enzymes [BR:
spio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WBJ53_16835
DNA replication proteins [BR:
spio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WBJ53_16835
DNA repair and recombination proteins [BR:
spio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WBJ53_16835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
WXC12654
LinkDB
All DBs
Position
4105661..4106788
Genome browser
AA seq
375 aa
AA seq
DB search
MLFNEIVGHTETKQLLLQAVQTNHLAHALLFDGGVGSANLALALALAQYVNCEDKQEQDA
CGRCASCIKIQKLVHPDLHMVFPVANMAKGKTSEAYLADWRKFLIDQPYRTLSEWLETVG
ADNKQGNISAEEARSILQKLSLKSYEGAYKIMLIWLPELMNVTSANALLKVLEEPPAQTL
FLLVTNQSDKLLITILSRTQRIAVRAFTDEEVATHLRQYSNLDETTARRIAYLADGNLSV
ALQLNRSETGQGAETDRHNWFAEWMRTCYRQDLISLVKQADQFDGFSKDKQKGLLEYSIR
LYRDLFLWQQGAGALLRLPDDEMAFVKNFSKVLTSTHIERIVNDLNEAAYHLERNARAKM
IMLDISLTFSRLIRS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctctttaacgaaatcgttggccatacagaaaccaagcagttattgctccaggcggtt
caaaccaaccacctggctcatgccttgctcttcgacggcggagtgggcagtgcgaatctg
gcactggcactggcactggctcagtatgtcaactgcgaagacaaacaggaacaggatgcc
tgtggccgatgcgcttcgtgcataaaaattcagaaactcgttcatcccgatctgcacatg
gtttttccggtggccaatatggccaaagggaaaacgtcggaagcctaccttgccgactgg
cgtaaatttctgatcgatcagccatatcgcacactgtcggaatggctggaaacagttggt
gccgacaataaacagggaaatatctcggccgaagaagcgcgcagtattttgcagaagctc
tcgcttaaatcgtatgaaggagcttataagatcatgctcatctggctaccggagctcatg
aacgtgacctctgccaatgcgctgctaaaagtactggaagaaccaccagctcaaacgctg
tttctgctggtgaccaatcagtccgataaactgctgattacgattctgtcgcgtacgcag
cgcatagccgttcgggctttcaccgacgaagaagtggccactcacctgcggcaatacagt
aatctggatgaaacaacggcccggcgcattgcctatctggctgatggtaacctatcggta
gcgctgcaactgaaccgtagcgaaaccggacaaggagccgaaacagatcgccacaactgg
tttgccgaatggatgcgtacctgctatcggcaagatttaatctccctggtaaaacaggcc
gaccagtttgatggtttcagcaaagacaagcaaaaaggattacttgaatacagtatccga
ttataccgcgatttgtttctgtggcaacaaggggctggtgcgctcctccgtttgcccgat
gatgaaatggcgttcgtaaaaaatttctctaaagttctgactagtacccatattgagcgg
attgtaaacgacttaaatgaagcggcttatcatctcgaacgaaatgcccgcgccaaaatg
attatgctggacatatcactcacctttagtcggttaatacggtcgtag
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