KEGG   Spirosoma sp. SC4-14: WBJ53_20435
Entry
WBJ53_20435       CDS       T11499                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spio  Spirosoma sp. SC4-14
Pathway
spio03030  DNA replication
spio03430  Mismatch repair
spio03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WBJ53_20435
   03430 Mismatch repair
    WBJ53_20435
   03440 Homologous recombination
    WBJ53_20435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spio03032]
    WBJ53_20435
   03400 DNA repair and recombination proteins [BR:spio03400]
    WBJ53_20435
Enzymes [BR:spio01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WBJ53_20435
DNA replication proteins [BR:spio03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     WBJ53_20435
DNA repair and recombination proteins [BR:spio03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     WBJ53_20435
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: WXC13350
LinkDB
Position
complement(5013525..5014139)
AA seq 204 aa
MPFLVLDLEMTGPEPDYNEIIQIGAVLFDDNWVEKGHYLTNVYPENEEAFSSSSEKIHNL
SLADLQDAPMIYDVLPEMEEWVCQKLGIRVPKDQLDRTPFLRNVIICGQSVINDINFLKE
AYRYEKLKWPYSRVLLDLHTLAYFTFRVLKANGRKVPDRLSLTAIANYFGFAREDGFHNA
LEDAVLTAKCLKEVFTLGEAMNVV
NT seq 615 nt   +upstreamnt  +downstreamnt
atgccatttttagtacttgatcttgaaatgactggccctgagccagactataatgaaatc
attcagattggcgctgtacttttcgacgacaattgggtcgagaaaggacactatctgacc
aacgtctatcctgagaatgaagaagccttctcttcctcgtctgaaaagattcataacctg
tcgctggccgatctgcaagatgcccctatgatttacgatgtattgcccgaaatggaagaa
tgggtttgtcagaaattaggtattcgggtacctaaagaccagttagaccgaacgcctttt
ctgcggaatgtgattatctgcgggcagagcgtaataaacgacattaattttctgaaagag
gcttatcggtatgaaaagctcaaatggccttactcacgcgtattgctcgacttacacacg
ctggcttattttacctttcgggttctgaaagctaacgggcgaaaagtgcccgaccgcctg
agtctgacggctattgccaattattttggttttgcccgcgaagacggctttcataatgca
ctggaagatgctgtgctgacggctaagtgcctgaaagaagtgtttacgctgggagaggct
atgaacgttgtctga

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