Spirosoma sp. SC4-14: WBJ53_21110
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Entry
WBJ53_21110 CDS
T11499
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00300
Lysine biosynthesis
spio00470
D-Amino acid metabolism
spio00550
Peptidoglycan biosynthesis
spio01100
Metabolic pathways
spio01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WBJ53_21110
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WBJ53_21110
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WBJ53_21110
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
WBJ53_21110
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spio01011
]
WBJ53_21110
Enzymes [BR:
spio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
WBJ53_21110
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
WBJ53_21110
Peptidoglycan biosynthesis and degradation proteins [BR:
spio01011
]
Precursor biosynthesis
Amino acid ligase
WBJ53_21110
Racemase
WBJ53_21110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
WHD_TBPIP
Motif
Other DBs
NCBI-ProteinID:
WXC13483
LinkDB
All DBs
Position
complement(5174026..5176545)
Genome browser
AA seq
839 aa
AA seq
DB search
MTTEQLQLTNFQWITDSRLVGDNATGAQTGNSVFFAIQGEHHDGHEFIGELYRKGIRYFV
VERSALTPDRRAEFLDYPDAHFVEVESSLQTIQLLAADHRRQFRIPVVGITGSNGKTIVK
EWLAQLLTDDFVIAKSPKSYNSQLGVPLSVHELNESHTLGIFEAGISRLHEMQALETIVR
PTIGIFTTIGTAHDEGFRTRKQKIAEKLRLFIHADTLVYCSDHTEIDEEVNLLLKAVNTD
MRFVNWSLTGRKAVYQAELQQDQLTLTGPAGTLTVQLPFADPASVEDLIHCIVTMLTLRA
YDAETLQTRLNRLRPVSMRLELKEGINNSVLIDDSYNNDVAGLQLALSFLSQQSTRDHRM
VILSDVLQSGQPEGELYEQVAGMMRANSIDQFIGIGPVISRNRHFFADTSLFFETTDEFL
TTFSASRVHSSDILVKGARPFSFERIVNRLQRKVHGTVLEINLDALTHNLNYYREKVGSE
IKLMVMVKAFAYGSGSAEVAQLLQFHRVDYLAVAYADEGVSLRQQGIDLPIMVMNPSPET
FPTLLDYQLEPEIYSMRLLREWGHFVAGINAGMAGNGDGRVLSIALPAIPATKCHLKIDT
GMHRLGFLEHEIPAVVDYLRSQPELQVATVFTHLVGADEAQFNAFSKQQYETFLRATATL
EAGLGYQPLRHVLNSAGIVRFPEFRLDMVRLGIGLYGVESSQIDKNAVRPVGTLHTVISQ
IKTVPAGESIGYSRRGVLNHEARIATLAIGYADGYDRRLGNGVGHVWVNGTRCPTVGNIC
MDMTMIDVTQATAAEGDDVIIFGNDIPITELAQQIGSIPYEILTGVSERVKRVFFKEGN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggagcaacttcaattaactaattttcagtggattaccgattcgaggctggtg
ggcgacaacgccactggtgcccaaacgggtaattcggtgttttttgcgattcagggcgaa
catcacgatggccatgaatttattggcgagttatatcgcaaaggcatccggtattttgtg
gtagaacggtcggcactaacgcccgaccgtcgggccgaatttctggattatcccgatgcg
cattttgtggaggtcgaaagcagtttacaaaccatacaactgttggcggccgatcatcgc
aggcagtttcgcatacctgttgttggcattacgggcagcaatggtaaaaccattgtgaaa
gaatggctggcgcaattactgaccgacgattttgtgattgccaaaagccccaaaagttat
aactcccagttaggagtaccgttgtcggttcatgaacttaatgagagccatacactggga
atcttcgaggcaggcatctcccgtttgcatgagatgcaggcattggaaaccatcgttcgc
cctaccattggtatttttaccaccatcggtacggctcatgatgagggctttcggacccga
aaacaaaagattgccgaaaaattacggctttttattcatgccgacacactcgtgtactgc
agcgaccacaccgaaattgatgaagaagttaacctgttgctcaaagcggtcaataccgat
atgcggtttgtgaactggtcgctaaccgggcgcaaagcagtttatcaggccgaactacag
caggatcagcttacgttgacaggaccagccggtacgctcacagtgcagttgccattcgcc
gatccggcttcggtcgaagatcttattcattgtattgttaccatgctgacgcttcgggct
tatgacgccgaaacgctacagacacgcttgaaccggttgcgacctgtttcgatgcggctg
gaactgaaggaaggtatcaacaactcggtgctgattgatgattcgtataacaacgatgta
gcgggtttacaactggcactcagttttttaagccagcaaagcacccgcgatcatcgaatg
gtcattctgtcggatgtgttgcagtcgggtcagccggaaggtgaactctatgagcaggtt
gccggtatgatgcgcgccaatagtatcgaccagtttattgggattggccctgtcatcagc
cggaataggcatttttttgccgatactagtttgtttttcgagactacagatgagttttta
acgacattctcagccagtcgtgtgcatagtagcgatatactggtaaaaggtgcccgtcct
ttttcgtttgagcgaatcgtaaaccggctgcaacgaaaagtgcatggtactgttcttgaa
atcaatcttgatgcgctgacgcataatttgaactattaccgggaaaaagttgggtctgaa
atcaaactgatggtcatggtgaaagcctttgcctacggtagtgggagtgccgaggtagct
cagttgctgcaatttcaccgggtcgattatctggctgtggcctatgccgatgagggcgtt
tcgcttcggcagcagggtatcgatttgcccattatggtcatgaacccgtctcccgaaacg
tttcctactctgctcgactatcagcttgagcccgaaatctatagtatgaggcttctgcgc
gagtgggggcactttgtggcggggattaatgcggggatggcggggaacggggatggccgg
gttttgtccattgctctccctgccatccccgctacgaagtgccacctcaaaatcgatacg
ggtatgcatcggctgggttttctggaacatgagattcctgctgttgtagactatctgaga
agccagcctgagcttcaggtagcaacggtatttacccatttggtgggagccgatgaagct
cagttcaatgcgttttcgaaacagcaatatgaaacctttctgcgggcaacggcaacactg
gaggctggcctgggctaccagcctttgcgccatgtgctgaactcggcgggtattgttcgc
tttcctgaatttcgactcgatatggtgcgtttagggattggtctttatggagttgagtcg
agccagattgataaaaatgccgttcggcccgtgggtacgctccatacggttatcagccag
atcaaaaccgttccggcaggagaatcaattgggtacagccgtcggggggtgctcaaccat
gaagcccgcatagcaacattggccattggttatgccgatggatacgaccgtcggctcgga
aatggggttggccatgtatgggtaaacggaacccgttgcccaacagtggggaatatttgc
atggatatgaccatgatcgatgtgacacaggcaacggccgccgaaggggatgatgtcatt
attttcggtaatgacatcccaattactgaactggcgcagcagatcggtagtattccgtat
gagattttgaccggggttagcgagcgcgtaaagcgggtgttttttaaggaagggaactaa
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