Spirosoma sp. SC4-14: WBJ53_21795
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Entry
WBJ53_21795 CDS
T11499
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio03030
DNA replication
spio03410
Base excision repair
spio03420
Nucleotide excision repair
spio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WBJ53_21795 (polA)
03410 Base excision repair
WBJ53_21795 (polA)
03420 Nucleotide excision repair
WBJ53_21795 (polA)
03440 Homologous recombination
WBJ53_21795 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spio03032
]
WBJ53_21795 (polA)
03400 DNA repair and recombination proteins [BR:
spio03400
]
WBJ53_21795 (polA)
Enzymes [BR:
spio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WBJ53_21795 (polA)
DNA replication proteins [BR:
spio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WBJ53_21795 (polA)
DNA repair and recombination proteins [BR:
spio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
WBJ53_21795 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WBJ53_21795 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WXC13616
LinkDB
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Position
5338549..5341590
Genome browser
AA seq
1013 aa
AA seq
DB search
MAQPQKKLFLLDALALIYRAHFAFNKSPRISSRGVNTSAIFGFMNSMIEVLNKEKPTHIG
VAFDSAKKTFRHEQFPMYKATRQSQPEDISIATPYIKQIIEAMHIPILILEGYEADDIIG
TIAKKAALADFEVYMMTPDKDYGQLVEEHIHIYKPAFMGKPAEKQGIKEVLERWQIERIE
QVTDMLGLVGDSVDNIPGIPGVGEKTAQKLIADFGSVENLIANADQLKGKLKENVVNYGQ
QGLLSKQLATIHLDVPVAFDEEHLRHSEYDKPRLAALLDELEFRQMKTRLLGANYDEKPL
PEAFKTPASAQMNLFDAPAFLPMPDTPSGSDELPFDFSSNVETQPIASPIRQQKTPVKAP
TASATAATPNGVTDAVSIEGNEQKPSADDQPAYLDVYPDYEIDPTQPERRKNIMSVKHDY
RLIDTDELRASLVHYLSLQESICFDSETTAIDPVEADLVGMSFAYRTGEAFYVPVPDNGD
QAQAIVDQFKPVFENPNIGKIGQNLKYDLLMLKKYGVEVQGKLFDTMIAHYLIEPEMRHN
MDMMAMTYLNYHPVEIEELIGKKGKGQLSMRDVDVQKVVEYAGEDADITLQLKETFAPRL
EKDNLHKLFDQVEMPLVRVLTDLELEGVTIDTNALADLSATLEIDMRQVQQEIYDIAGEP
FNIGSPKQLGEVLFDKLKLDKNAKKTKTGQYATGEEILSKLEAEHEIARKILDYRELVKL
KNTYVDVLPTLISKRTGRIHTSFNQAVAATGRLSSVNPNLQNIPIRTPRGQEIRKAFVPR
GPEFLIMSADYSQIELRIMAAFSGDQTMLDAFNNGVDIHTQTASKVFRVPISEVTSDMRR
KAKTINFGIIYGISSFGLSQRLKIPRKEAAQIIDDYFTEFPAIKGFIDQSIEKARGFGYA
ETILGRRRYLRDINSRNQTDRMFAERNAVNAPIQGSAADMLKIAMIRIHDFMQAERLKSK
MILTVHDELVFDAHRSEIDLLRERVDDIMKNAIPMAVRMETGIGVGENWLLAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccacaaaaaaaactctttctgttagatgcgctggccctgatctaccgcgcc
cattttgcatttaacaaatctccccggatctcatcgcgtggggtaaatacctccgccatt
tttggctttatgaattcgatgattgaggtcctgaacaaagaaaaacccacgcacattggg
gtagcgttcgactcagcaaaaaaaacgtttcggcacgaacagttcccgatgtataaggcc
acacgccagtcgcaacccgaagacataagcatagccacgccttacattaaacaaattatt
gaggctatgcacatcccgattttgattctggaaggctacgaagccgacgacattattgga
actattgccaaaaaagcagcactggccgattttgaggtgtatatgatgacccccgataaa
gattacgggcaactggttgaagagcatattcatatctataagcccgcctttatgggcaaa
ccagccgaaaagcagggtatcaaagaagtactggagcgctggcagatcgaacgcatcgaa
caagtgactgatatgctcggtctggttggcgattcggtcgataacattccgggaatcccg
ggcgttggcgaaaaaacggcccaaaaactcattgccgactttggttcggtcgaaaacctg
attgccaatgccgaccagctaaagggcaaactgaaagaaaacgtcgttaactacggccag
caaggtctgctgtcgaaacaactggccactattcatctcgacgttccggtcgctttcgac
gaagagcacctgcgccatagtgaatacgacaagccccggctggcagcattgctcgacgag
ctggaattccggcagatgaaaacccgcctgctgggagccaattacgacgaaaagccattg
cccgaagccttcaaaacgcccgcatcggcccaaatgaatctgttcgatgctccggcgttt
ttgccaatgcctgatactccatcaggaagcgatgagttaccattcgatttttcgagtaat
gtagagacgcaacccattgcgtctcctattcgtcagcaaaaaacaccagtcaaagcccct
accgcatcggcaacagcagccacaccgaatggcgtaaccgatgcagtatcgattgaaggt
aacgagcagaaacccagtgccgacgatcagcccgcttatctcgacgtttatcctgattat
gagattgatcctacgcagcccgagcgacgaaagaatatcatgtcggtaaaacacgattac
cgactgatcgatacagacgaattgcgggccagcctggttcattacctaagtcttcaggag
agcatttgcttcgactccgaaaccaccgctattgacccggttgaagccgatctggtcgga
atgtcgtttgcctaccgcacgggcgaagcgttctatgtgcccgttcctgacaatggcgat
caggcacaggccattgttgatcagtttaaaccagtattcgaaaacccaaacatcggcaaa
attggtcagaaccttaagtatgacctgctgatgctgaaaaaatatggcgttgaagtacag
ggaaaactcttcgacaccatgattgctcactatctgattgagcccgaaatgcggcacaac
atggacatgatggccatgacgtatctgaactaccatccggtcgaaatcgaagagctgatt
ggaaagaaaggcaaggggcaattgtcgatgcgcgatgtggatgtgcaaaaggttgtggag
tatgcgggcgaagacgccgacattacgctgcaactgaaagaaacctttgcgccccggctc
gaaaaagataacctccataagctattcgatcaggtcgaaatgccactcgttcgggtgcta
accgatctggagctggaaggcgttacgatcgataccaatgccctggccgacctgtcggcc
acgctggaaattgatatgcggcaggtgcagcaggagatctacgacatcgccggtgaacca
tttaacattgggtcgccgaaacaattaggcgaagtgctgttcgataaactgaaactcgat
aaaaacgccaaaaagaccaaaaccggccagtatgcaacaggcgaagagatcctgtcgaaa
ctggaagccgaacacgaaattgcccgtaaaattctggactatcgcgaactggtcaagctc
aaaaatacctatgtcgatgtgctgccaacgctgatcagcaaacgaaccggacgaattcat
acctcatttaatcaggctgtggccgcaaccggacgcctatcgtcggtgaaccctaacctg
caaaacattccgattcgcacaccacgcggtcaggaaattcggaaggcgtttgtgccacgt
gggccggagtttctgatcatgtcggccgactattcgcagatcgaactacgaattatggct
gctttcagtggcgaccagaccatgcttgatgcctttaacaacggcgtcgacattcataca
caaacagccagcaaggtcttccgtgtgcccatcagcgaggttacgagcgatatgcgccgg
aaagccaaaacaatcaacttcggtatcatctacggcatttcatcctttggcttgtcgcag
cggctgaagattccgcgtaaagaagccgctcaaatcatcgacgactactttaccgaattc
ccggccataaaagggtttatcgatcaaagcattgaaaaagcccgtggctttggctatgcc
gaaaccattctggggcgtcgtcggtatctgcgcgacatcaactcccgcaaccagaccgat
cggatgtttgccgagcgcaacgccgtcaacgcacccattcagggcagtgcagccgatatg
cttaagattgccatgattcgtatccacgatttcatgcaggccgaacggctcaaatcgaag
atgatcctgaccgttcatgacgaactggtatttgatgctcaccgctccgaaattgatctg
ctgcgcgaacgcgtcgacgacatcatgaagaacgccattcccatggccgttcggatggaa
accggcattggtgttggcgaaaactggctgctggcgcactga
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