Spirosoma sp. SC4-14: WBJ53_27310
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Entry
WBJ53_27310 CDS
T11499
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
spio Spirosoma sp. SC4-14
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
WBJ53_27310
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Paralog
GFIT
Motif
Pfam:
BSH_RND
CzcB_C
HH_MFP_RND
BSH_CzcB
HH_EMRA
Biotin_lipoyl
YknX_C
BSH_YknX
Beta-barrel_YknX
Beta-barrel_AprE
HH_YBHG
BSH_CusB
RND-MFP_C
HH_CzcB
HH_AprE
BSH_LcnD
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WXC14687
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Position
complement(6617667..6619082)
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AA seq
471 aa
AA seq
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MRKKSNRIWWILGGLVVVLVVGLVAAKQTGIIGKPKPTEVDFAEVKRTNIIERVSASGRV
QPQVEVKISPDVSGEIIGLYVNEGDPVKAGQLLCRIRPDNYESMMARAKATVNQSRAQLE
QSKASVAQSSARLIRAKADYERNRKLFADKVVSSADLETSEANYNVAKQEVEAANANVRA
AQFNIQSAEASLRDASENLRKTTIYSPVNGTVSKLNIELGERVVGTSQMAGTEIMRIANL
QNMEVRVNVNENDIVRVTLGDTADIEVDSYTTAGRKFKGIVYEIANTANGLAGSTGSSAA
ATVSTDAVTEFEVKVKILNNSYSDLLAQKDKKGYPFKPGMTASVEIITDRKMGVLAVPIA
AVTTRGEGVDATGEKEKPDDNDNQQSGNTNQPEKKEKVKEIVFVNVGGKAVQREVKTGIS
DFENIEVKSGLKPGEQIVSGPFIAVSKKLKDGELIAKRDPNKNKKKEEKEE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaaatctaacagaatttggtggattttaggtggactggttgtggtgcttgtc
gttgggttagtagccgccaaacaaacaggaatcattgggaagcccaaacccaccgaagtc
gattttgccgaagttaagcgtactaatatcatcgaacgggttagcgcatcggggcgcgtt
cagccacaggtagaagtaaaaataagtccggatgtgtcgggcgaaatcattggcctctat
gtgaacgaaggtgatccggtaaaggccggacagttgctgtgccgtattcggcccgataac
tacgaatcgatgatggcacgggccaaagccaccgtaaatcagagcagggcacaactagag
cagtcgaaagcatcggtagcccagtcgagtgcgcggctgattcgggcaaaggccgactac
gaacgtaatcgcaaattgtttgccgataaagtagtgtcgtcggccgatctggaaaccagc
gaggccaactacaatgttgccaaacaggaagttgaagcagccaatgccaatgttcgggcg
gctcagttcaatatccagagtgctgaggccagcctgcgcgacgccagtgaaaacctgcgt
aaaaccacaatttattcgcccgtgaacggcaccgtttcgaagctcaacatcgagttaggc
gaacgggtagttggtacatcgcaaatggccggaaccgaaatcatgcgtattgccaatctg
caaaatatggaagtgcgggtcaatgtgaatgaaaacgatattgttcgggttaccctgggc
gacactgccgatattgaagttgattcgtacacgactgccggtcgtaaatttaaaggcatc
gtttatgaaattgccaatacggctaatgggctggccggaagcacgggttcgtcggctgcg
gctaccgtatcgaccgatgccgttacggagtttgaagtaaaagtgaaaattctgaataat
tcttattccgacctactggctcagaaagataaaaaaggatacccattcaagccgggaatg
accgcttcggtcgaaatcattaccgaccgaaaaatgggcgtactggcagttccaattgcc
gccgtcacaacgcgtggcgaaggggtagatgctacgggtgagaaagaaaaacccgatgat
aacgacaaccagcagtctggcaataccaaccaacccgaaaagaaagagaaggtaaaagaa
attgtttttgtgaatgttggcgggaaagctgttcagcgcgaagtaaaaaccggtatcagc
gacttcgaaaatattgaagtgaaatcaggcctgaaaccaggagaacagattgtttcagga
ccatttattgccgtctcgaaaaagctgaaagatggtgagctgattgccaaacgggacccg
aataagaacaaaaagaaagaggagaaagaagaatag
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