Spirosoma sp. SC4-14: WBJ53_28790
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Entry
WBJ53_28790 CDS
T11499
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00053
Ascorbate and aldarate metabolism
spio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
WBJ53_28790 (garD)
Enzymes [BR:
spio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
WBJ53_28790 (garD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
WXC14977
LinkDB
All DBs
Position
complement(6978404..6979936)
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AA seq
510 aa
AA seq
DB search
MTDEPIVLKTTSIDNVAIVANLAGLPQGAVVLNGIVLEEAIPMGHKVALQSFETGDDVIR
YGQVIGYANRPIRAGCWVNEWNISMPKPPNLTDIPYIQKPIPALERLEGFTFQGYKNPDG
SVGTKNVLGITTSVQCVAGITDFICQKIRRELLPRYPNVDDVVAFNHSYGCGVAIDAPGA
IVPIRTIKHIAQNPNFGGEIMIIGLGCEKLRPERLLPNDQSPAESSILYLQDEAFDGFGD
MVAGIMDLAEKHLRKLNERQRTTCPASDLVVGMQCGGSDAFSGLTGNPVSGFAADLIVRA
GGTVFFSEVTEVRDAIHLLVPRAVDETVAQALKDEMAWYDAYLQQGQADRSANTTPGNKG
GGLSNIVEKALGSVAKSGTSPIVDVLSPGEKIRRKGLNFVATPASDFVCGTLQLAAGMNM
HVFITGRGTPYGLSMVPVIKVSSNSKLANRWHDLIDFDAGPVAFGAKSIDQMGWELFHLI
LDIASGTRNVATDLLGIHNDLVLFNPGPLT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgagcctattgtactgaaaaccacatccatcgataacgtagccattgttgcc
aatctggcggggttgccgcaaggcgcggtcgttctcaacggcatcgtactcgaagaagcg
attccgatgggacacaaagtcgcgctgcaatcgttcgaaacgggagacgacgtaatccgt
tatgggcaggtaattggttatgccaatcggcctatccgggcaggttgctgggtcaatgaa
tggaatatcagtatgccgaagccgccaaatctgaccgatattccgtacatacagaaaccc
ataccagcactggaacgcctggagggatttaccttccagggttacaaaaatccagacggt
agtgtcggaacgaagaatgtgctgggaattactaccagcgtacagtgcgtggccggtatt
accgactttatctgtcagaaaatcaggcgcgaattgctacccagataccctaacgtagac
gatgtggttgccttcaatcacagttatggctgcggagtggccatcgacgcgccgggagcc
attgtgcccattcgaacaatcaaacacattgctcaaaatccgaattttggcggtgagatt
atgattatcggcctagggtgcgaaaaattacgtcccgaacgattattgccgaatgaccaa
agcccagccgagagttcgattctgtatttgcaggacgaagccttcgatgggtttggcgat
atggtagcggggattatggatcttgccgaaaaacatctccgaaaactgaatgaacgccag
cgcactacctgccccgcatccgatctggtggtgggtatgcagtgtggtggtagcgatgcc
ttttctggcctgaccggtaatccggtgtcgggttttgcggccgatctgatagtgcgggcg
ggtgggacggtctttttctccgaagtaaccgaagttcgtgatgccattcatctgctggta
ccccgcgctgtcgacgaaacggtagcgcaggcgctcaaagacgaaatggcctggtatgat
gcgtatctgcaacagggacaggccgaccgaagcgccaacacaacacccggcaacaaaggt
ggtgggctgagtaatattgttgaaaaagcgctggggtcggtggccaaatccggcacgagc
ccgattgtcgatgtactttcgccgggcgagaaaatccgaagaaaagggttgaattttgtg
gcaaccccggccagcgattttgtgtgtggtacactgcaactggcggccggtatgaatatg
cacgtttttattaccggacgcggcactccctacgggctgagcatggtacccgtcataaag
gtgagttcaaattcaaaactggccaaccgctggcacgaccttattgatttcgatgcgggg
ccggtagcattcggcgcgaaaagcatcgaccaaatgggttgggaattgtttcatcttatt
ctggacattgcgagtggaacccggaacgtagcgactgatctactgggcattcacaacgac
ttagtactgttcaaccccggcccgttgacctga
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