Spirosoma sp. SC4-14: WBJ53_30155
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Entry
WBJ53_30155 CDS
T11499
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00260
Glycine, serine and threonine metabolism
spio00460
Cyanoamino acid metabolism
spio00630
Glyoxylate and dicarboxylate metabolism
spio00670
One carbon pool by folate
spio00680
Methane metabolism
spio01100
Metabolic pathways
spio01110
Biosynthesis of secondary metabolites
spio01120
Microbial metabolism in diverse environments
spio01200
Carbon metabolism
spio01230
Biosynthesis of amino acids
spio01240
Biosynthesis of cofactors
spio04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
WBJ53_30155 (glyA)
09102 Energy metabolism
00680 Methane metabolism
WBJ53_30155 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WBJ53_30155 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
WBJ53_30155 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
WBJ53_30155 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
WBJ53_30155 (glyA)
Enzymes [BR:
spio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
WBJ53_30155 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WXC15243
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Position
complement(7304475..7305764)
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AA seq
429 aa
AA seq
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MTTVTTTRDTQVFDLIAKEKHRQESGIELIASENFVSPAVMEAAGSVLTNKYAEGLPGKR
YYGGCEVVDQVEQIAIDRAKELFGATWANVQPHSGAQANTAVFLACLQPGDTILGFDLSH
GGHLTHGSPVNISGKYFRPTFYGVEKETGVINYDVVEETAKREKPKMLICGASAYSRDWD
YARLRAIADEVGALLLADVSHPAGLIAKGLLNDPLAYAHIVTTTTHKTLRGTRGGMIMMR
DDFENPFGIKTLKGELRLMSSLLDSGVFPGTQGGPLEHIIAAKAVAFGEALSDDFYDYAV
QVKANAQAMASAFLNRGYDIISGGTDNHLMLIDLRSKGLTGKLAENTLIKADITINKNMV
PFDDKSPMVTSGIRVGTAAMTTRGLKESDMEQIVVYIDKVLMNHDNEATLATVKEEINEW
MKAFPLYKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgtcaccaccacccgcgatacgcaggtatttgacctgattgccaaagaaaaa
caccgtcaggagtcgggcattgaattaattgcgtctgaaaattttgtgtcacctgccgtt
atggaagcggccgggagcgttctaactaacaaatatgccgaaggattacccggtaagcgc
tactacggtggctgtgaggtagttgatcaggtcgaacaaattgccattgatcgggctaaa
gaactgtttggtgcaacctgggccaatgtgcagccgcactcgggtgctcaggccaatacg
gccgtatttctggcctgccttcagccgggcgataccattttgggtttcgacctgtcgcac
ggtggtcaccttacccacgggtcgccagttaatatttcaggaaaatatttccggccaacg
ttctacggtgtagagaaggaaacaggcgttatcaactacgatgttgtagaagaaaccgct
aagcgcgaaaaacctaaaatgctgatctgcggtgcgtcggcctatagccgcgactgggat
tatgcccgtttgcgtgccattgccgacgaagtaggcgcgctgttgctggccgacgtgtcg
cacccggccggactgattgcgaaagggttgctgaacgatccgttggcttacgcacatatt
gttacaacaactacgcacaaaaccctccgtggtacgcgtggtggtatgattatgatgcgt
gatgatttcgaaaatccgtttggtatcaaaaccctgaaaggcgaattgcggttaatgtcg
tcgctgctcgattcgggcgtattccctggtacgcagggcgggccgctggagcatattatt
gcagccaaagccgtagcatttggcgaagctctatccgacgatttctacgattatgccgtt
caggtgaaagccaatgcgcaggcaatggccagcgccttcctgaatcgtggttacgacatt
atttcggggggtacggataatcacctgatgctgatcgatctgcgctccaaaggcctgacc
ggtaaactggccgaaaataccctgattaaggcagacatcaccatcaataagaatatggtt
ccgttcgatgataagtcgccgatggtaacgtcgggtattcgggtgggaacggccgccatg
acaacgcgcggactgaaagaatcggacatggagcaaattgtcgtatatatcgacaaggtg
ctgatgaatcatgacaacgaagcgaccttagcgaccgttaaagaggaaatcaacgagtgg
atgaaagcatttccgctctataaaagttaa
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