Spirosoma sp. SC4-14: WBJ53_30600
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Entry
WBJ53_30600 CDS
T11499
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00061
Fatty acid biosynthesis
spio00071
Fatty acid degradation
spio01100
Metabolic pathways
spio01212
Fatty acid metabolism
spio02024
Quorum sensing
spio04146
Peroxisome
Module
spio_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
WBJ53_30600
00071 Fatty acid degradation
WBJ53_30600
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
WBJ53_30600
09145 Cellular community - prokaryotes
02024 Quorum sensing
WBJ53_30600
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spio01004
]
WBJ53_30600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spio04147
]
WBJ53_30600
Enzymes [BR:
spio01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
WBJ53_30600
Lipid biosynthesis proteins [BR:
spio01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
WBJ53_30600
Exosome [BR:
spio04147
]
Exosomal proteins
Exosomal proteins of breast milk
WBJ53_30600
Exosomal proteins of breast cancer cells
WBJ53_30600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WXC15329
LinkDB
All DBs
Position
7406091..7407797
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AA seq
568 aa
AA seq
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METPVTEQTYPWQRFYPKGVPYEINPDAYPSLAALIEEGCERFSNKPAYACMGKQITYSE
LNTLSKQFASFLQHDLGLKKGDRIAIQMPNTLQYPVAMFGALRAGLAVVNTNPLYTPREM
QHQFNDSGAKAIVILANFAANLEKIINQTKIETVIVTQLGDLLGFPKKQIVNAVVKYVKK
LVPAYHLPKAISFNDALNRGSRQAFQPVAIQNTDLAFVQYTGGTTGVSKGAMLTHRNIIA
NVEGQHAWMQPCGIVVGEGIFVAALPLYHVYALTTNALSALKNGCMNLLITNPRDLNAFI
DDLKKYKITAFTGVNTLYNGLLNHPRISEVDFSHLKVTSAGGMALQTSVAERWTKLTGNT
PCEGYGLTETSPVLSSNPVDGTVRVGTIGIPWPSTVMKIIREDGSDAPIGEAGEIVARGP
QVFPGYYNRPDETAKVMMGDWFKTGDIGVMNEDGFFKIVDRKKDMILVSGFNVYPNEIED
VVAQCPGVLEVACIGVPDQKSTEIVKIFVVKKDPDLTADAIKAYCRENLTPYKIPKLIEF
RTELPKSNVGKILRRPLRDEELARLKNS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcccgtaaccgaacagacatatccctggcaacgcttttaccctaaaggtgtt
ccatacgaaataaatccagatgcttacccatccctggcggcattaatcgaagaaggctgt
gaacggtttagcaataaacctgcttatgcgtgcatgggtaagcaaatcacctatagtgag
ctgaatacactttccaaacaatttgcctcttttctacaacatgacctgggtttgaaaaaa
ggggatcggattgcgatccagatgcccaatacgcttcagtatccggtagccatgtttgga
gccttacgcgctggccttgctgtggtgaacaccaatccgttatatacgccccgcgagatg
cagcatcagtttaacgattcgggcgcaaaagcaatcgtgattctggccaattttgccgct
aacctggagaagatcatcaaccagaccaaaattgaaactgttattgtaacgcaactgggc
gatttgctcggtttccctaaaaagcagattgttaatgcggttgttaagtacgtcaaaaaa
ctggttccggcttatcatcttccgaaagcaatttctttcaacgatgccctgaatcgaggg
agccgtcaggctttccagccagtggccatccagaatacagatttggcctttgttcagtat
accggtggcactaccggtgtttccaaaggagccatgctgacgcaccgaaatatcattgcg
aacgttgagggacaacatgcctggatgcaaccgtgcggtattgttgtaggcgaaggcatt
tttgtagccgccttaccgctctaccacgtttatgccctcacaaccaatgctctgtcagcc
cttaaaaatggctgtatgaacttgttaattacgaatccccgcgatctgaatgccttcatc
gacgatctgaagaaatataaaatcaccgccttcactggcgtcaatacgctttataatggc
ttgctcaatcacccccgaatcagtgaagtcgattttagccacctgaaagtcacgtcggca
ggtggaatggcgcttcaaacatcggtagccgaacgctggaccaagctaaccggcaatact
ccctgcgaaggatatggccttaccgaaacttcacccgtattgtcgtccaatcctgtcgat
ggcaccgttcgggtaggtacgatcggtattccctggccgagcaccgtcatgaaaatcatt
cgtgaagatggctccgatgcccctattggcgaagccggagaaattgtcgcccgcggtccc
caggtgtttccaggctattataatcggcccgacgaaaccgccaaagtgatgatgggcgac
tggtttaaaaccggcgatattggtgtgatgaacgaagatggattctttaagatcgtcgac
cggaaaaaagatatgattctggtttcaggcttcaatgtatatcctaacgaaattgaggat
gtggtggcgcaatgtccgggtgtactggaggtcgcctgcattggcgttcccgatcagaaa
tcgacggaaattgttaagatttttgtagtaaaaaaagaccctgatttaaccgccgacgcc
attaaggcctattgccgcgaaaacctcacgccctacaaaattccgaagcttattgagttc
agaaccgaactgccgaaatcgaacgtaggtaaaattcttcgtcggcccctgcgggacgaa
gagttagccaggctgaagaactcctga
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