Spirosoma sp. SC4-14: WBJ53_30685
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Entry
WBJ53_30685 CDS
T11499
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio00920
Sulfur metabolism
spio01100
Metabolic pathways
spio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
WBJ53_30685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spio03400
]
WBJ53_30685
Enzymes [BR:
spio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
WBJ53_30685
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
WBJ53_30685
DNA repair and recombination proteins [BR:
spio03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
WBJ53_30685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Glyco_trans_4_4
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WXC15346
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Position
7425885..7426901
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AA seq
338 aa
AA seq
DB search
MQDIEAIGAAIEQPKTVLITTHQNPDADAMGSSLGLAGYLRKKGHRVTVVTPTDYGQNLH
WMSGNDEVIAFDEKVRVQVSQLMEEADLIFCLDFSSIDRIRDLAPMVRQSRAQKVLIDHH
LEPESFADLIFWDPTAAATAELIFRLIVQLGDKALIDVPVAECLYAGLMTDTGSFRHSNT
TGAVHRMAADLVDLNIDVSTIHRRIFDNVSIDKLRLLGYILNEKLKVLPDYKFAYITLTD
GELKRYRSKTGDTEGMVNYALSVEGVVMAAILIDRNDEIRISFRSIGDFSVRELASKHFD
GGGHRNAAGGRSKLSLAETEQRLLNILPQYQQQLLETV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacattgaagcgattggcgcagcgatcgaacaaccaaaaactgtgctgattacc
actcaccagaatcccgatgccgatgcgatgggatcatcgctcggcctggctggatatctc
cgaaaaaaaggccatcgggtaaccgttgttacaccaactgactatgggcaaaacctgcat
tggatgtcaggcaacgacgaagttattgccttcgacgaaaaagttcgggtgcaggtcagt
caactgatggaagaggccgatctgattttctgtctcgacttttcaagcatcgaccgaatc
cgcgatctggctcccatggttcggcaatcgcgggcccaaaaagttctgatcgatcaccat
ctcgaacccgaatcctttgccgatctgattttctgggaccccactgcggccgccactgcc
gagctaatatttaggctaatcgtccagttaggcgacaaagcactcattgatgttccggtt
gccgaatgcctgtatgctgggctaatgaccgatacgggctcgttccggcattcgaacact
accggcgctgtgcatcgaatggctgctgatctggttgatctgaatatcgacgttagtacc
attcatcggcgcattttcgataatgtatccatcgataagttacggctgctgggctatatt
cttaacgaaaagctgaaagttcttcccgactataagtttgcctatattaccttaaccgat
ggggagttaaagcggtatcggtctaaaactggtgatacggaaggcatggttaactatgcc
ctttcggtggaaggggttgttatggctgccattctcatcgatagaaatgatgaaatccgg
atttcgttccgatcgatcggcgatttttcggtgcgcgaactagccagcaaacacttcgat
ggtggaggccatcggaatgcggccggtggtcggtcgaagttaagtttggccgaaaccgaa
caaagactactcaatatattaccccagtaccagcagcagttgctggaaactgtttaa
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