Spirosoma sp. SC4-14: WBJ53_31270
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Entry
WBJ53_31270 CDS
T11499
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spio Spirosoma sp. SC4-14
Pathway
spio03030
DNA replication
spio03430
Mismatch repair
spio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WBJ53_31270
03430 Mismatch repair
WBJ53_31270
03440 Homologous recombination
WBJ53_31270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spio03032
]
WBJ53_31270
03400 DNA repair and recombination proteins [BR:
spio03400
]
WBJ53_31270
Enzymes [BR:
spio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WBJ53_31270
DNA replication proteins [BR:
spio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WBJ53_31270
DNA repair and recombination proteins [BR:
spio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WBJ53_31270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WXC15455
LinkDB
All DBs
Position
7555932..7556753
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AA seq
273 aa
AA seq
DB search
MTHQLALKKPLAFFDLETTGINVAKDRIIDICIVKAMPNGEVISKSQRVNPGMPIPLESS
LIHGIYDDDVKDAPPFKTVARTLAQFMEGCDLAGFNSNRFDVPLLVEEFLRANVDFEMKN
RRMVDAQRIFHLMEPRNLTAAYKFYCNKDLIGAHGAEADTIASLEVLNAQVQRYRGMVAK
TDSGQDIIFENDIDMLHSLTANNNVDLAGRIITNGKGEEVFNFGKHKGLPVLEVLKKEPS
FYDWMLKGEFPLDTKRRLTEIRLRMFSNGNGRK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaacttgccctcaaaaagccgctggctttttttgatctggaaacgacaggc
atcaatgttgctaaagaccgtatcattgacatctgcattgtgaaagcaatgcccaatggt
gaggtcattagcaaaagccagcgtgtaaatccaggtatgccgattccacttgaatcgagc
ttaattcatggaatttatgacgacgacgtaaaggacgctcctccttttaagacggttgcc
cgaacgctggcgcagtttatggaaggatgcgatctggctggttttaacagcaatcgtttc
gatgtcccattattagtcgaagaatttttgcgggccaatgttgattttgagatgaaaaat
cgccggatggttgatgcccagcggatttttcatctcatggaaccccgcaacttaacagca
gcctacaaattttattgcaacaaagatctgattggtgctcatggagccgaagccgataca
attgcttcgctcgaagtattgaatgcccaggtccaacgctatcggggcatggttgccaaa
actgacagcgggcaggatattatttttgaaaacgacatcgacatgcttcacagccttacg
gccaataataatgttgatttggcgggccgaattattacaaacggtaaaggcgaagaagtt
tttaatttcggcaaacataaagggctacccgtgctggaagtgctcaaaaaagagccatct
ttctatgactggatgctaaaaggtgaatttccactcgacacgaaacggcgcttaaccgaa
atccggctgcgcatgtttagtaacggaaatggaagaaaatag
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