Spirosoma sp. SC4-14: WBJ53_32255
Help
Entry
WBJ53_32255 CDS
T11499
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
spio Spirosoma sp. SC4-14
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spio02000
]
WBJ53_32255
Transporters [BR:
spio02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WBJ53_32255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DUF8808
Motif
Other DBs
NCBI-ProteinID:
WXC18970
LinkDB
All DBs
Position
pcontig2:complement(35651..37396)
Genome browser
AA seq
581 aa
AA seq
DB search
MKSRIFLLLITSSILWTGCSDFLDTQDLTEKTNATFPLTAGDYDQAIAAVYSAQRDAYFD
QINSFIGISSYLDDDYIANGRALFDDPMIRGYERYQVRNFDQLLVPWQNYYKAIYRANFV
LESLAKNSTGLTDPQKASYKGQALYLRASCYLDLCRLFGGVPLKTATESNIPARATVDSC
FARIASDLKNAIELMPAKSFQNVNKNNELFNANKYAAEAMMGRAFLFYTGLYGKAELPLA
EGGTISKATVLDYLHDVINTSGYGLVDDFRNLWLYAFANTDYKYARDNKLNWIGEKGNNN
ECLYMISFSGLGTNNQWDRFQNSVSTSVPGITPFGAGSGMSAVNPKVYEEWDNDDLRKTG
SIWNVKDAGTEGIEFSSTPAPNSGKFYFNSQSNVEETGYIQKKYCHIYVTVGGKRTAANT
VLNGTATKNNTNDATVGQYIIRFSDVLLMAAELGSPNAQTYFDRVRSRAYLKNSGNTPIA
GKPFYKAATLENIQDERRHEFAFEGIRWYDLLRWRIVDQQIAKYKTDVLVYKFGVPEKIT
IRYRPETKGLLPIPQSQINLSNGVLKQNEGWGGNEGIYSGI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtagaatctttctgctgctgatcacgtcgtccatcctctggaccgggtgttcg
gacttcctggacacacaggatttaacggaaaaaacaaatgcgaccttccctctcacggcg
ggggattatgatcaggccatagccgccgtgtattccgctcagcgtgatgcctattttgat
caaatcaatagtttcattggcatttcgtcctacctggacgatgactatattgccaatgga
agagcattgttcgatgatccgatgattcggggatatgagcggtatcaggttcgcaatttc
gatcagttgctagtcccctggcaaaattattacaaggctatctaccgggctaatttcgtt
ttggagagccttgccaagaatagcacaggcctgacagacccgcaaaaagcaagttataaa
gggcaggccctctatttgcgggcttcctgttatttagatctatgccgtttatttggtggg
gtacccttaaaaacagcgaccgaatcgaatattccggcaagagctacggtcgactcttgc
tttgcccgaattgccagtgacttaaaaaacgccattgagctaatgcctgccaagtcgttt
caaaatgtgaataaaaataacgagctattcaatgccaataaatacgcggcagaggccatg
atgggacgggcatttcttttttacaccggcttgtatggaaaagcggaactgccactggcc
gaaggaggcaccatatcgaaagcaaccgtactggattatctgcacgacgtaatcaatact
agcggctatgggttagtcgacgactttcggaacttgtggttatatgccttcgccaatacg
gattataagtacgcccgagataacaaactcaattggattggtgaaaaaggcaataataat
gaatgcctttatatgatctcgttctctggcttggggactaacaaccaatgggatcgtttt
caaaatagcgtgagcacctctgtgccaggtatcacgccgtttggggcaggaagtggcatg
agcgctgtcaaccccaaagtttacgaggagtgggataatgatgatcttcgaaaaaccggt
tcaatctggaatgtaaaagacgcgggcacagaagggattgagtttagcagtacacccgca
ccaaatagtggaaagttctattttaactcccagagcaacgttgaggagaccgggtacata
caaaaaaagtactgccatatctacgtaacggtaggtggtaaacgtacggctgccaacacg
gtactgaatggtacggccacaaaaaacaatacgaatgacgctaccgtaggccagtacatt
attcgcttctctgatgtgttgctgatggcagccgaattaggtagcccgaatgcacaaact
tattttgatcgggtcaggtcgcgggcctatctgaaaaactcaggcaatacccctattgcc
ggtaagcccttttataaagcagccacgctggagaatattcaggatgagcgcaggcatgaa
ttcgcctttgagggtattcgttggtacgacttacttcgctggcgaatcgttgaccagcaa
attgccaaatacaaaaccgatgtactggtttacaagtttggcgtccccgagaaaattacc
attcgataccggcccgaaaccaaaggcctgctacctattcctcaaagtcagataaactta
agtaacggcgtattaaagcaaaatgagggatggggtggtaatgagggcatttattccggc
atttaa
DBGET
integrated database retrieval system
