Spirillospora sp. NBC_01491: OHA34_02545
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Entry
OHA34_02545 CDS
T09711
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
spiq
Spirillospora sp. NBC_01491
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spiq03019
]
OHA34_02545
Enzymes [BR:
spiq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OHA34_02545
Messenger RNA biogenesis [BR:
spiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OHA34_02545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WUU90705
LinkDB
All DBs
Position
513399..516164
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AA seq
921 aa
AA seq
DB search
MTTPDALSAEDSPAQRYSAYRRRTAGSGPALLDFKTLYDFDLDAFQIEACQALEDGSGVL
VAAPTGSGKTVVGEFAVHLALTGGGKCFYTTPIKALSNQKYADLVRRYGPEKVGLLTGDN
SVNGEAPIVVMTTEVLRNMLYAGSQTLTGLAFVVMDEVHYLADRFRGAVWEEVIIHVPDS
VRIVALSATVSNAEEFGEWLHEVRGDTAVIVDEHRPVPLFQHMLVGSRMYDLFVDTGKGR
DRQARLNPQLTRMAVDEVRRAKVNQGRRTGHRRAARPERYRPPARPDVIERLDRAGLLPA
ITFIFSRAGCDAAVLQCLHAGTRLTSKEEAEEIRAHADLRTADISREDLRILGYTDFVSA
LERGVAAHHAGMLPTFKEIVEELFTRGMIKAVFATETLALGINMPARTVVIEKLDKWNGE
AHVALTPGEYTQLTGRAGRRGIDVEGHAVVVWGPKVDPGSVGGLASTRTYPLNSSFQPSY
NMAVNLVGAVGADRARTLLEESFAQFQADRAVVGLARQVHKNEEALAGYAEAAECHLGDF
MEYAALRRRLSDREAEMSRERSSARRAEAARSLEHLRPGDVILVPSGRRSGLAVVLDPGV
GRRSDGPAPLVLTVSRSVQRLSILDFPRAVEPVERIRIPKSFSPRNPQDRRDLASTLRNK
VPHDPKEGRRGRDVPAADDREIADLRDGLRRHPVHGCDKREDHARWAERYFRLERETEQL
RRRVEGRSQVIARTFDRVCAVLEQLGYLSGGEVTAEGRRLGRIYNELDLLTAESLRDGLW
ERLDHAELAACVSALVYESRQSDEAAPPRTPTGNVQDALAAMVRLWGELDAVERDNRVSF
LREPDLGFAWTAYRWAKGDDLDEVLLENDMTAGDFVRAVKQLLDLLGQVADAAPPNSHIR
KTARRAMDAMRRGVVAYSSVA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccccgacgcgttgtcggccgaagactccccggcgcagcggtactccgcgtac
cgcaggcgcaccgccgggtccggccccgccctgctcgacttcaagaccctgtacgacttc
gatctggacgccttccagatcgaggcgtgccaggccttggaggacggcagcggcgtgctg
gtcgcggcgcccaccgggtccggcaagaccgtggtgggcgagttcgccgtccacctggcg
ctgaccggcggcggcaagtgcttctacaccacgccgatcaaggcgctgtccaaccagaag
tacgccgacctggtgcgccgctacgggcccgagaaggtcggcctgctcaccggcgacaac
agcgtcaacggggaggccccgatcgtcgtgatgacgaccgaggtgctccgcaacatgctc
tacgccgggtcccagaccctcaccgggctcgccttcgtggtgatggacgaggtgcactac
ctcgccgaccggttccgcggcgcggtctgggaggaggtcatcatccacgtgccggactcg
gtccggatcgtggcgctgtcggcgaccgtcagcaacgccgaggagttcggcgagtggctg
cacgaggtgcgcggcgacaccgcggtgatcgtcgacgagcaccggccggtgccgctgttc
cagcacatgctggtcggctcccggatgtacgacctgttcgtcgacaccggcaagggccgc
gaccggcaggcccggctgaacccgcagctcacccggatggcggtggacgaggtccgccgc
gccaaggtcaaccagggccgccgcaccggccaccgccgcgcggcccgcccggagcggtac
cgcccgccggcccgcccggacgtgatcgagcgcctcgaccgcgccgggctgctgcccgcg
atcaccttcatcttcagccgggccggctgcgacgccgccgtcctccagtgcctgcacgcc
ggcacccggctgacctccaaggaggaggccgaggagatccgcgcgcacgccgacctgcgc
accgccgacatctcccgcgaggacctgcggatcctcggctacaccgacttcgtgtcggcg
ctggagcgcggcgtggccgcgcaccacgccgggatgctgcccaccttcaaggagatcgtc
gaggagctgttcacccgcgggatgatcaaggcggtgttcgccaccgagaccctcgccctc
ggcatcaacatgcccgcccgcaccgtggtgatcgagaagctcgacaagtggaacggcgag
gcccacgtcgcgctcacccccggcgagtacacccagctcaccgggcgggccgggcgccgc
ggcatcgacgtcgagggacacgcggtggtggtgtggggccccaaggtcgaccccggctcg
gtcggcggcctggccagcacccgcacctacccgctcaactccagcttccagccgtcctac
aacatggcggtcaacctggtcggcgcggtcggcgccgaccgcgcccgcaccctgctggag
gagtcgttcgcgcagttccaggccgaccgggccgtggtcgggctggcccggcaggtccac
aagaacgaggaggccctcgccgggtacgccgaggccgccgagtgccatctgggcgacttc
atggagtacgcggcgctgcgccgcaggctgtcggaccgcgaggccgagatgtcccgcgag
cggtcctcggcccgccgcgccgaggcggccaggtcgctggagcacctgcggcccggggac
gtcatcctggtcccgtccgggcgccgttccggcctcgcggtggtgctggacccgggggtc
ggccgccggtccgacgggcccgccccgctcgtgctgacggtgagccggtcggtgcagcgg
ctgtcgatcctggacttcccgcgcgcggtcgagccggtcgagcggatccgcatccccaag
tcgttcagcccccgcaacccgcaggaccgccgcgacctggcctcgaccctgcgcaacaag
gtcccgcacgaccccaaggaggggcgccgcggccgggacgtcccggccgccgacgaccgc
gagatcgccgacctgcgcgacgggctgcgccgccacccggtgcacggctgcgacaagcgg
gaggaccacgcgcgctgggccgagcggtacttccgcctcgagcgcgagaccgagcagctc
cgccgccgcgtcgagggccgctcccaggtgatcgcccgcaccttcgaccgggtctgcgcc
gtcctggagcagctcggctacctgtccggcggcgaggtcacggccgagggccgccggctc
ggccgcatctacaacgagctcgacctgctcaccgccgagagcctgcgcgacgggctgtgg
gagcggctcgaccacgccgagctcgccgcgtgcgtgtcggcgctggtgtacgagtcgcgg
cagtccgacgaggccgcgccgccgcgcaccccgaccgggaacgtgcaggacgcgctggcg
gcgatggtgcggctctggggcgagctcgacgcggtcgagcgcgacaaccgggtgtcgttc
ctgcgcgagcccgatctcgggttcgcctggaccgcctaccggtgggccaagggcgacgac
ctcgacgaggtgctgctggagaacgacatgaccgcgggcgacttcgtccgcgccgtcaag
cagctcctcgacctgctcggccaggtcgccgacgccgccccgcccaacagccacatccgc
aagaccgcccgccgggcgatggacgccatgcgccgcggcgtcgtcgcctattcctcggtc
gcctga
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