Spirillospora sp. NBC_01491: OHA34_21210
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Entry
OHA34_21210 CDS
T09711
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
spiq
Spirillospora sp. NBC_01491
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_21210
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
OHA34_21210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
DUF6890
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
WUU87027
LinkDB
All DBs
Position
complement(4548899..4549363)
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AA seq
154 aa
AA seq
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MPGSDAVSGEAWQAPEGSWASSAANRRSMLGNRNRDTSPELKLRSLVHAAGFRYRVAAKP
LPGMRRTADLVFRPTRVAVFVDGCYWHGCPEHFVPPKTNPDYWQGKIGRNMERDRDTDER
LAEAGWLVLRFWEHEPAGHCARAVCEAVQSRRSE
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcagcgatgcggtcagcggtgaggcctggcaggccccggaaggctcgtgggcg
tcgtcggccgcgaaccgccgcagcatgctgggcaatcgcaaccgcgacacgtcgcctgag
ctgaagctccggtcgctggttcatgccgccgggttccgctatcgggtggcggccaagccg
ctccccgggatgcgcaggaccgcagacctggtcttccggccgacccgggtcgccgtcttc
gtcgacggctgctactggcacggctgtcctgagcatttcgtgccgcccaagaccaacccg
gactactggcagggaaagatcggccgcaacatggagcgggaccgggacacggacgagcgt
ctagccgaagcagggtggctcgttctgcggttctgggagcacgaaccggctggtcactgc
gcacgcgcggtctgtgaggcggtccagtcccgccgttccgagtga
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