Spirillospora sp. NBC_01491: OHA34_22800
Help
Entry
OHA34_22800 CDS
T09711
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OHA34_22800 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spiq03019
]
OHA34_22800 (recQ)
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_22800 (recQ)
Enzymes [BR:
spiq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OHA34_22800 (recQ)
Messenger RNA biogenesis [BR:
spiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OHA34_22800 (recQ)
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OHA34_22800 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WUU87329
LinkDB
All DBs
Position
4901372..4903213
Genome browser
AA seq
613 aa
AA seq
DB search
MASPEIGAEPSEALETLRRVFGYDAFRDGQAEIIEQVVSGRDALVLMPTGGGKSLCYQIP
ALVRKGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDYDERRLVEAEFASGELDLLY
LAPERLRVPATLELLDRGTIALFAIDEAHCVSQWGHDFRPDYLMLSGLHERWPDVPRIAL
TATATQATREEIASRLNLEDARHFVASFDRPNIQYRIEPKSDAKRQLLQLLRTEHAGDAG
IVYCLSRNSVEKNAAFLTENGIEAVPYHAGLDARVRAANQARFLREDGLVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVNLRKMIEGGEGDA
AHRRRQSLHLDSMLALCETVECRRVQLLNYFGQSGDPCGNCDTCIAPPETWDGTVPAQKV
LSTVFRLDRERRQKFGAGHIVDILLGKKNAKVIQFDHDALTVFGIGTDLRDVEWRGVVRQ
LLAQGLMAVESNYGALVLTDASAEVLRGDRRVMMRREPERAATKAAKTAKDRKAPVDLPA
EAMPIFERLRGWRAATAKEQGVPAYVIFHDATLREIATALPSSLAGLGKISGVGENKLAK
YGDGVLEVLAASE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctgaaatcggcgccgagccgagcgaggcgctggagacgctgcggcgcgtg
ttcggctacgacgcgttccgggacggccaggccgagatcatcgagcaggtggtctccggc
cgggacgcgctggtcctgatgccgaccggtggcggcaagtcgctgtgctaccagatcccc
gcactcgtgcggaagggcgtcggcgtcgtcatctcgccgctcatcgcgctgatgcaggac
caggtcgacgcgctgcgcgccctcggcgtccgggccgggttcctcaactccacccaggac
tacgacgagcgccggctcgtcgaggccgagttcgcctccggcgagctcgacctgctctac
ctggcgcccgagcggctgcgcgtcccggcgacgctggagctgctcgaccgcggcacgatc
gcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtgggggcacgacttccggccc
gactacctgatgctgtcggggctgcacgagcgctggcccgacgtcccccggatcgcgctg
accgcgaccgccacccaggccacccgcgaggagatcgcgtcccggctcaacctggaggac
gcgcgccacttcgtggcgagcttcgaccggcccaacatccagtaccgcatcgagcccaag
agcgacgccaagcggcagctcctccagctcctgcgcaccgagcacgccggcgacgcgggc
atcgtctactgcctgtcgcgcaactcggtcgagaagaacgccgcgttcctcaccgagaac
ggcatcgaggccgtcccctaccacgcgggtctcgacgcgcgggtccgcgcggccaaccag
gcccggttcctgcgcgaggacggcctggtggtggtcgcgacgatcgcgttcgggatgggc
atcgacaagcccgacgtccggttcgtcgcgcacctcgacctgcccaagtcggtcgagggc
tactaccaggagaccggacgcgccggacgcgacggccagccgtccaccgcctggctcgcc
tacgggctccaggacgtcgtcaacctgcgcaagatgatcgagggcggcgagggcgacgcc
gcgcaccgccgccggcagagcctgcacctcgactcgatgctggcgctctgcgagacggtc
gagtgccgccgcgtccagctcctcaactacttcggccagtccggcgacccgtgcggcaac
tgcgacacctgcatcgcgccgcccgagacgtgggacggcacggtccccgcgcagaaggtg
ctgtccaccgtcttccggctcgaccgcgaacggcgccagaagttcggcgccgggcacatc
gtcgacatcctgctcggcaagaagaacgccaaggtcatccagttcgaccatgacgcgctg
accgtcttcggcatcggcaccgacctgcgcgacgtcgaatggcgcggcgtcgtccggcag
ctcctggcccagggcctgatggccgtcgagagcaactacggcgcgctggtgctgaccgac
gcgagcgccgaggtgctgcgcggcgaccgccgggtcatgatgcggcgcgagcccgagcgg
gccgcgacgaaggcggccaagaccgccaaggaccgcaaggcgcccgtcgacctgcccgcc
gaggcgatgccgatcttcgagcggctgcgcggctggcgcgccgccaccgccaaggagcag
ggcgtccccgcgtacgtgatcttccacgacgcgacgctgcgcgagatcgccaccgccctg
ccgtcctcgctggccggcctgggcaagatcagcggcgtcggcgagaacaagctggccaag
tacggcgacggcgtcctggaggttctcgccgcctccgagtga
DBGET
integrated database retrieval system
