Spirillospora sp. NBC_01491: OHA34_27770
Help
Entry
OHA34_27770 CDS
T09711
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spiq
Spirillospora sp. NBC_01491
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spiq03016
]
OHA34_27770 (thpR)
Enzymes [BR:
spiq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OHA34_27770 (thpR)
Transfer RNA biogenesis [BR:
spiq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OHA34_27770 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WUU88245
UniProt:
A0AAU5W9W9
LinkDB
All DBs
Position
5945880..5946443
Genome browser
AA seq
187 aa
AA seq
DB search
MRLFVALVPPPVVLDEVEEAVAPLKAEGPELAWIRRELIHVTLSFLGAVDDRTLDRLLPR
LERAVARHGRLSLSLAGAGAFPGNGAHARVLWTGLYGDRRGLAGLAASTSAAGRRAGTLP
DKHPSFRPHLTLARSRQPADVRPVMEGLSTFAGTAWTADAVHLMRSHPPGKLHGQVEYES
MKTWSLR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgtggcgctcgtaccgccgccggtcgtcctcgacgaggtcgaggaggcc
gtcgcgcccctcaaggcggaggggcccgaactcgcgtggatccggcgggagctgatccac
gtcacgctgagcttcctcggcgcggtcgacgaccgcaccctcgaccgtctgctgccccgg
ttggaacgtgccgtcgcccggcacggccggctgtcgctgtccctcgcgggcgcgggcgcc
ttccccggcaacggcgcgcacgcgcgggtgctgtggacgggcctctacggcgaccggcgc
gggctggccgggctggccgcctcgacgtccgccgccggacggcgcgccggcacgctcccc
gacaagcacccgtccttccggccgcacctcacgctcgcccgctcccggcagcccgcggac
gtgcggccggtgatggaggggctgtcgacgttcgcgggcaccgcgtggaccgccgacgcc
gtccacctgatgcgcagccaccccccgggcaagctgcacggccaggtggagtacgagtcc
atgaagacctggtcactgcgctga
DBGET
integrated database retrieval system
