Spirillospora sp. NBC_01491: OHA34_30895
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Entry
OHA34_30895 CDS
T09711
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq03420
Nucleotide excision repair
spiq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OHA34_30895
03430 Mismatch repair
OHA34_30895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_30895
Enzymes [BR:
spiq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OHA34_30895
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OHA34_30895
MMR (mismatch excision repair)
Other MMR factors
OHA34_30895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WUU88825
UniProt:
A0AAU5WEJ0
LinkDB
All DBs
Position
6641100..6644555
Genome browser
AA seq
1151 aa
AA seq
DB search
MISPAELARLLEIPEPTLEQARVIEAPLAPLAVIAGAGSGKSETMAARVVWLVANGFVRP
ERVLGLTFTRKAAAELGARVRKRLDALREVLPADELERLGGESLFDGEPMVSTYHSYASR
LFGDHALREALEPTMRLISPAVAWQICSRVVDAYAGPMDRVDWAPDTVTKAVMELAGDLS
EHLRTAGDVRRVGTWLDERFAAVGKPLKAQRDILAKHAVREQLMPLIEAYHRAKAGREVV
DHGDQMALAARIAYKHPEVGMIERSRFSVVLLDEYQDTSQAQLVLLRSLFAGGHPVTAVG
DPCQSIYGWRGASAGNLLRFAHDFPAQAPIEGRRAVPAAVTQLSRSFRNGERILDAAARV
QEELRADTKAVPRLVPGAGREARGRVECALFATIEDEADRIAARVAAVMAGDPQAAPDGG
TWEGDPLRYSDIAVLARKRSQFPLIRRALESRGVPVEVVGLGGLLTVPEVQDVVATLRVM
HDPTAGASLARLLTGPRWRLGPRDLVALGRRARALAQESARDVTPPEPPELPEPPSAASL
SDSAALPDPSDHSDPAAPDPGVRPGGGDTAAAGGEDPLRQLVSELNQETGSLVDALDDLG
EPAAYSPEGHGRLRRLRDELRTLRGQVGLPLPDLVNEVERALGLDIEVAARSGLDPVTAR
ADLDAFIGAAATFAGDAEDPTLGAFLAYLKAAETEEFGLEAGRVGETDSVKLLTVHASKG
LEWPVVIVPGLSFTAQKNGNPAKGSIFPSPPQNATRWTANPRVLPFPLRGDRADLPELPG
LDKDDLAAFDRACGERDLREERRLAYVAVTRASSLLIVTGYWWGASGRPLGPSPFLEEVR
DVCLAGAGTVAAWADPPEDGAANPLLADADEAQWPAGPGERGRSDASARERYEAVVDAAR
MVEDAMRGRARHWAGDDGLADADRGRMSAWARDVELLLAERDRGRGGDGLLVELPAHLSV
SSLVSLARDPAALARQIRRPMPRPPAPYARRGTAFHAWLEGRWGQQRLLDPGELPGAADE
GAADDSHLARLRERFEASEWAAREPLDIEVPFETVIGDRLIRGRMDAVFTGRDGGYEVVD
WKTGAPPSGAEAGYTSVQLAAYRLAWAELADVPVERVSAAFHYVGANVTVRPADLLDAAG
LTALLESVPAA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagtcccgcggaactggccaggctgctggagatccccgagccgaccctggagcag
gcgcgggtgatcgaggcgccgctggcgccgctggcggtgatcgcgggcgccgggtcgggc
aagagcgagacgatggcggcccgggtggtgtggctggtcgccaacgggttcgtccggccc
gagcgggtcctcggcctgaccttcacccgcaaggccgcggccgagctgggcgcgcgggtg
cgcaagcgcctcgacgcgctgcgcgaggtgctgcccgcggacgagctcgaacggctcggc
ggcgagtcgctgttcgacggcgagccgatggtgtcgacctaccactcctacgcgtcccgg
ctgttcggcgaccacgcgctgcgcgaggcgctggagccgacgatgcggctgatctccccg
gcggtcgcgtggcagatctgctcgcgggtcgtcgacgcctacgccgggccgatggaccgt
gtcgactgggcgcccgacactgtcaccaaggcggtgatggagctcgccggcgacctgtcc
gagcacctgcgcaccgcgggcgacgtccgccgggtcgggacgtggctggacgagcggttc
gccgcggtcgggaagccgctcaaggcgcagcgcgacatcctcgccaagcatgccgtccgc
gagcagctcatgccgctgatcgaggcgtaccaccgcgccaaggccggacgggaggtcgtc
gaccacggcgaccagatggcgctggccgcgcggatcgcctacaagcatcccgaggtcggg
atgatcgagcggtcccggttctcggtggtgctgctcgacgagtaccaggacaccagccag
gcgcagctcgtgctgctgcgctcgctgttcgcgggcgggcacccggtgacggccgtcggc
gacccgtgccagtcgatctacggctggcgcggcgcgagcgcgggcaacctgctccgcttc
gcccacgatttccccgcgcaggccccgatcgagggacggcgcgcggttccggcggcggtg
acgcagctcagccgcagcttccgcaacggtgagcggatcctggacgcggcggcccgggtg
caggaggagctgcgcgccgacaccaaggcggtgccgcgcctggtgcccggcgcgggccgc
gaggcgcggggccgcgtcgagtgcgcgctgttcgccacgatcgaggacgaggccgaccgg
atcgccgcccgcgtcgccgccgtcatggccggcgacccgcaggccgcgcccgacggcggg
acgtgggagggcgacccgctccgctactccgacatcgccgtgctggcccgcaagcggtcg
cagttcccgctgatccgccgcgccctggagagccgcggcgtcccggtcgaggtggtcggc
ctgggcgggctcctcaccgtccccgaggtccaggacgtggtggccacgctgcgcgtcatg
cacgacccgaccgccggcgcgtccctcgcccggctcctcaccggcccccgctggcgcctc
ggcccccgcgacctggtggccctcggccgccgcgcccgggccctcgcccaggagtccgcc
cgcgacgtcaccccgccagaacccccagagctcccagagccccccagcgccgcgtccctg
tcggattccgcggccctgccggatccctcggaccactcggatcccgcggccccggacccc
ggcgtgcgacccggcggcggcgacaccgctgcggcgggtggtgaggatccgctgcggcag
ctcgtcagcgagctgaaccaggagaccgggagcctcgtcgacgcgctcgacgacctcggc
gagcccgcggcgtactcgccggaggggcacggccggctccgccggctccgcgacgagctg
cgcaccctgcgcgggcaggtcgggctgccgctgcccgacctggtcaacgaggtggagcgg
gcgctcgggctcgacatcgaggtcgcggccaggtccgggctcgacccggtcaccgcgcgc
gccgacctggacgcgttcatcggcgccgccgccacgttcgccggcgacgccgaggacccg
acgctcggcgcgttcctcgcctacctcaaggcggccgagaccgaggagttcgggctggag
gccggacgggtcggcgagaccgacagcgtcaagctgctcaccgtgcacgcctccaagggc
ctggaatggccggtcgtgatcgtcccgggcctgtcgttcaccgcgcagaagaacggcaac
ccggccaagggctcgatcttcccctcgccgccgcagaacgcgacccgctggacggccaac
ccgcgcgtcctgccgttcccgctgcgcggcgaccgcgccgatctacccgagctgcccggc
ctggacaaggacgacctcgccgcgttcgaccgggcgtgcggcgaacgcgacctgcgcgag
gagcggcggctcgcctacgtggcggtgacccgcgcgtccagcctgctgatcgtgaccggc
tactggtggggcgcgtccggccggccgctcggcccgtccccgtttttggaggaggtccgc
gacgtctgcctcgccggggcggggacggtcgcggcctgggccgacccgcccgaggacggc
gccgccaacccgctgctcgcggacgcggacgaggcgcagtggcccgccgggccgggtgag
cgcggccggtccgacgcctcggcgcgggaacgctacgaggcggtcgtcgacgccgcccgc
atggtcgaggacgcgatgcggggccgcgcccgccactgggccggcgacgacggcctcgcg
gacgccgaccggggccgcatgtcggcgtgggcgcgcgacgtcgagctgctgctggccgaa
cgcgaccgcggtcggggcggcgacgggctgctcgtcgagctgcccgcgcacctgtcggtg
tcgtcgctggtctccctggcccgtgacccggccgcgctggcccggcagatccgccgcccg
atgccgcgtccgcccgccccctacgcccgccgcggcaccgcgttccacgcctggctggag
ggccgctgggggcagcagcggctgctcgacccgggcgagctgcccggcgccgccgacgag
ggcgccgccgacgactcccatctggcccggctccgcgagcggttcgaggcgtcagaatgg
gccgcgcgcgagccgctcgacatcgaggtcccgttcgagaccgtgatcggcgaccggctg
atccggggccggatggacgcggtgttcacgggccgagacggcggctatgaggtggtcgac
tggaagaccggcgccccgccgtccggcgccgaggccgggtacacgtcggtgcagctcgcg
gcctaccggctggcctgggccgagctcgcggacgtccccgtcgagcgggtcagcgccgcg
ttccactacgtcggcgcgaacgtcaccgtccggcccgccgacctgctcgacgccgccggg
ctgaccgccctcctggagagcgttcccgccgcctga
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