Spirillospora sp. NBC_01491: OHA34_33870
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Entry
OHA34_33870 CDS
T09711
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq03030
DNA replication
spiq03430
Mismatch repair
spiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHA34_33870
03430 Mismatch repair
OHA34_33870
03440 Homologous recombination
OHA34_33870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiq03032
]
OHA34_33870
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_33870
Enzymes [BR:
spiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHA34_33870
DNA replication proteins [BR:
spiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHA34_33870
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHA34_33870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
WUU89380
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All DBs
Position
7276638..7278422
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AA seq
594 aa
AA seq
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MLTSRVASAPRPASGYRHDWAFVDVETSGLRAERDRVLSLAVLTAGPDGTPEAEYTTLLD
PGCDPGPVHVHGLTAERLRGAPQFEQVAGRVAELLRGRVMVAHNAQFDYGFLAGEFARAG
LTLPVERRLCTLTLNRRLAPPTPDLRLGTLAAHYGAGLFRAHDALEDAKALAGVLRGSLA
AASALGLPLPLVACPPRAAGGHPPRIPKQRCAFLSPGRLPSGGPLVQGMKIAVTGPTATP
REELVARAVAAGLNVMGSVSRHTSVLVADDAGSGSAKARRAAAEGVPVIGEREFARLLGD
VRPGTPHEPVRGAEGGGPVPAPAAKRRPPAGPLGSRRVLVLGGTHPEAVAARTRVVALGG
AAAVNLSATVTDVLALRGARDDRRMARIVALELPVRDPAWLDAPDRLGLPAASARRAAPV
VLPRGAVIDLPVTPDTARWTVTAAWAQAASCEVDVVAFLVDEDGQVACDEDMVFYGAPET
SDGAVRLSTDGPAEQTVAIDLAALPAAVRRVTVAAAIDGAVRFGDLGPIEIVAGPAGGGT
PVAQATVDAATTERTLLLGELYRRGPSWRLRAVGQGYDFGLDGLARSFGVDVEE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtccagggtcgcctccgccccgcgcccggcctccggttaccgccacgactgg
gccttcgtcgatgtcgagacctccggtctccgcgcggagcgcgaccgggtgctgtccctg
gcggtgctcacggccgggccggacggcacgccggaggcggagtacaccacgctcctcgat
cccggctgcgaccccgggcccgtgcacgtccacggcctcaccgccgagcggctgcgcggc
gcgccccagttcgagcaggtcgccgggcgcgtcgccgagctgctccgcggacgggtgatg
gtggcgcacaacgcccagttcgactacgggttcctcgccggggagttcgcccgcgcgggc
ctgaccctgcccgtcgagcggcggctgtgcacgctcacgctgaaccgccggctggccccg
ccgacccccgatctgcggctcggcacgctggccgcgcactacggcgccgggctcttccgc
gcccatgacgcgctggaggacgccaaggcgctcgcgggcgtcctgcgcggctcgctggcc
gccgcgagcgcgctcggcctgccgctcccgctggtcgcctgcccgccccgcgcggccggc
ggccacccgccgcggatccccaagcagcgatgtgcgttcctgagccccggacggctgccg
tccggcggcccgctcgtgcagggcatgaagatcgccgtcacgggcccgaccgcgaccccg
cgcgaggagctggtggcgcgggccgtcgcggccgggctgaacgtgatgggctcggtcagc
cggcacaccagcgtgctcgtcgccgacgacgccggctccggttcggccaaggcgcgccgg
gcggcggccgaaggcgtcccggtcatcggcgagcgcgagttcgcccggctgctcggcgac
gtccggccgggcaccccgcacgagccggtgcggggcgcggagggcgggggaccggtcccg
gccccggcggcgaagcggcgcccgccggccgggccgctcggctcccggcgggtgctggtc
ctcggcgggacgcaccccgaggcggtggccgcgcggacccgcgtcgtcgccctcggcggc
gccgccgcggtgaacctctcggccaccgtcaccgacgtgctggcgctccgcggcgcgcgg
gacgaccgccggatggcccggatcgtcgcgctcgaactcccggtccgcgacccggcgtgg
ctcgatgcgcccgaccggctcggcctccccgccgcgtccgcccggcgggccgcgccggtg
gtgctgcccaggggagcggtgatcgacctcccggtcaccccggacacggcgcgctggacg
gtcaccgccgcctgggcccaggcggcgtcctgcgaggtcgacgtcgtcgccttcctcgtg
gacgaggacggccaggtggcgtgcgacgaggacatggtcttctacggggcgcccgagaca
tcggacggggcggtgcggctgtcgaccgacgggccggccgagcagaccgtcgcgatcgac
ctggccgcgctgccggcggccgtccgcagggtcacggtggcggcggcgatcgacggcgcg
gtgcgcttcggcgacctcggcccgatcgagatcgtcgcgggcccggccggcggcggcacg
cccgtcgcccaggccaccgtggacgccgcgaccaccgagcgcaccctgctgctcggcgag
ctctaccggcgggggccctcatggcgcctgcgcgcggtcgggcagggctacgacttcggg
ctggacggcctggcccgctcgttcggcgtggacgtcgaagagtga
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