Spirillospora sp. NBC_01491: OHA34_35445
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Entry
OHA34_35445 CDS
T09711
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq03030
DNA replication
spiq03430
Mismatch repair
spiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHA34_35445
03430 Mismatch repair
OHA34_35445
03440 Homologous recombination
OHA34_35445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiq03032
]
OHA34_35445
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_35445
Enzymes [BR:
spiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHA34_35445
DNA replication proteins [BR:
spiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHA34_35445
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHA34_35445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DEDDh_C
DUF7508
UVR
Motif
Other DBs
NCBI-ProteinID:
WUU89669
LinkDB
All DBs
Position
7615822..7617600
Genome browser
AA seq
592 aa
AA seq
DB search
MTAAHGVQGTLDDLGTPLAGVTFVVVDLETTGGSPAESAITEIGAVKVRGGAELGHFGTL
VDPGGPIPPFITALTGITQTMVTAAPRMEAVLPAFLEFARGSVLVAHNAPFDIGFLKAAC
AASGYAWPAFPIVDTVDLARRVLGRDEVPNCKLGTLARFFRAATEPTHRALADARATVDV
LHGLIERIGSFGVTTLEELRGFAKAPTPEQRRKRHLADDVPSAPGVYLFEDPGGEALYVG
KSGDLRSRVRAYFTGSETRRRVREMVGLAERVRTIVCATGLEAEVRELRLIAAYKPRYNR
RSKFPERAIWMKLTVEPFPRLSIVRECRDDGAVYLGPMSSRQQAEDARAALHEAVPLRQC
TQRLTLRLIERGRARACALADLGRCGAPCDGREPEEAYALHTAAARSVMRGDVRPVVAAA
QARIDRLVSELRYEEAAAERDRLAAFVRAAARGQRLAALAGCSQLVAARPAFDGGWELSV
VRFGRLAAAGTIPPHAHPRPYVDALIATAETVFAPAGGAPGGVPPGPGPAGGATAEEMEC
VLRWLDAPGVRLVEVDGVWSCPAHGAEGLRRRIDNAYVAPDPGDQGAARPLR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcacacggcgtccaggggaccctcgacgatctcggcacgccgctcgccggc
gtcaccttcgtggtcgtcgacctggagaccaccggcggctccccggccgagtcggccatc
accgagatcggcgcggtcaaggtgcgcggcggcgccgagctcggccacttcggcacgctc
gtcgacccgggcggcccgatcccgccgttcatcaccgcgctcaccggcatcacccagacc
atggtgacggccgcgccccggatggaagcggtgctgccggcgttcctggagttcgcccgc
ggcagcgtgctcgtcgcgcacaacgccccgttcgacatcggcttcctcaaggccgcctgc
gcggcgagcggctacgcctggcccgccttccccatcgtcgacaccgtcgacctggcacgc
cgggtgctgggcagggacgaggtccccaactgcaaactgggcacgctggcccggttcttc
cgcgccgccaccgagccgacgcaccgggcgctcgccgacgcccgcgccaccgtcgacgtg
ctgcacggcctgatcgagcgcatcggctcgttcggcgtcaccacgctcgaggagctgcgc
gggttcgccaaggcgcccacgcccgagcagcgccgcaagcggcacctcgccgacgacgtg
ccgagcgcccccggcgtctacctgttcgaggatcccggcggcgaggcgctctacgtcggc
aagagcggcgacctgcggtcccgggtgcgcgcctacttcaccggctcggagacccgccgg
cgggtccgtgagatggtcggcctggccgagcgcgtccgcaccatcgtgtgcgccaccggg
ctcgaggccgaggtccgcgagctgcgcctgatcgccgcgtacaagccgcgctacaaccgg
cgctcgaagttccccgagcgggccatctggatgaagctcaccgtcgagccgttcccgcgg
ctgtccatcgtgcgcgagtgccgcgacgacggcgcggtgtacctcgggccgatgtcgtcc
cggcagcaggccgaggacgcccgcgcggcgctgcacgaggccgtcccgctgcggcagtgc
acccagcggctcacgctccggctgatcgagcgcggccgggcccgtgcctgcgcgctcgcc
gatctcggccggtgcggcgcgccctgcgacggccgcgagcccgaagaggcgtacgcgctg
cacacggccgccgcccggtcggtcatgcgcggcgacgtgcggccggtcgtggcggcggcg
caggcccgcatcgaccggctcgtgtccgagctgcgctacgaggaggccgccgccgaacgc
gaccggctggccgcgttcgtccgcgccgcggcgcgcgggcagcggctcgccgcgctggcc
ggctgctcccagctcgtcgcggccaggcccgcgttcgacggcggctgggagctgtcggtg
gtgcggttcggcaggctcgccgcggccgggacgatcccgccgcacgcgcacccccgtccc
tacgtcgacgcgctcatcgccaccgccgagaccgtcttcgcgcccgccgggggagcaccg
ggcggcgtgccgcccggtcccggcccggccgggggcgccaccgccgaggagatggagtgc
gtgctccgctggctcgacgcgccgggcgtgcggctggtcgaggtcgacggcgtctggagc
tgccccgcccacggcgccgaggggctgcgccgccgcatcgacaacgcctacgtggcaccc
gatccgggagatcagggagcggctcggccactaaggtga
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