Spirillospora sp. NBC_01491: OHA34_37715
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Entry
OHA34_37715 CDS
T09711
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq03030
DNA replication
spiq03430
Mismatch repair
spiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHA34_37715 (dnaE)
03430 Mismatch repair
OHA34_37715 (dnaE)
03440 Homologous recombination
OHA34_37715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiq03032
]
OHA34_37715 (dnaE)
03400 DNA repair and recombination proteins [BR:
spiq03400
]
OHA34_37715 (dnaE)
Enzymes [BR:
spiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHA34_37715 (dnaE)
DNA replication proteins [BR:
spiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHA34_37715 (dnaE)
DNA repair and recombination proteins [BR:
spiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHA34_37715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF5559
Motif
Other DBs
NCBI-ProteinID:
WUU90092
LinkDB
All DBs
Position
8100945..8104475
Genome browser
AA seq
1176 aa
AA seq
DB search
MKRPFTHLHVHTQYSLLDGAARLKDLFAACGEMGMTHIAMTDHGNLHGAYDFFHQAAAAG
VTPIIGIEAYVAPGARQDKRKIRWGQPHQKRDDVSGSGGYTHKTIWATDRTGLHNLFRLS
SDAYAEGWLQKWPRTDRESIARWSRGLVASTGCPSGEVQTRLRLGQDAEALRAAAEYQDV
FGKDGYFLELMDHGIEIERRVRDGLLDIGRKLGIPPLVTNDSHYTRADEATAHDALLCIQ
TGKNLTDPDRFRFDGTGYHLKPAEEMYAIDSSDAWQDGCRNTALIAERVDTTGWFEKRDL
MPRFDVPEGYTEITWFREEVEAGLRRRFPGGLGDGYREQAEYEMDVIVQMGFPGYFLVVA
DFIMWAKTNGIAVGPGRGSAAGSLVSYAMGITDLDPIEHGLIFERFLNPERVSMPDVDID
FDERRRGEVIRYVTAKYGADKVAMIGTYGTIKAKNAVKDSARVLGHPYALGDRITKAMPA
DAGGKGIDLNGITDPSHPRYAEAGEVRAMYEGEPDVRQVIDTAKGVEGLVRQMGVHAAGV
IMSSETITDHVPVWVRHSDGVTITQWDYPSCEALGLLKMDFLGLRNLTIMDDAIALIEKN
TGVALDLLALPLDDPETYALFGRGDTLGVFQFDGGAMRSLMRLMKPDGFEDITAVTALYR
PGPMGMNSHTNYALRKNGQQQITPIHPDLEEPLRDVLGLTYGLVVYQEQVQKAAQVLAGY
TLGQADLLRRAMGKKKKEVLDKEFVPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
AACYALVSYWTAYLKANHPAEYMSALLTSVRDDKDKSAVYLNECRHMGITVLPPNVNESE
ADFAAQGDDVILFGLTAVRNVGRNVVDAIIRSRGAGGRYGSFPDFLDKVDAVACNKRAVE
SLIKAGAFDELGHTRKGLTAAFEPMVDDAVRVKRRRAEGQFDLFGTLAEGDGGGPGGVLE
AAFAADEWDKAHLLAQEREMLGLYVSDHPLFGVEHVLREGSDASISQLTGGEHADGAVVT
IGGIVSGLQRKMTKKGNAWAIATVEDLAGAIECLFFPAAYQLVSALLAEDTVVFVKGRLD
KREDVPRLVAMELTVPELDAAGEGAPVRLEMRAARVTPQSVGQLKEILQAHPGPAEVQLW
VRGRHKTTVYRLAFRVDARPGFWADLKAAIAVTRAP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacggccattcacgcacctgcacgtccacacccagtactcgctgctggacggcgcg
gcgcggctcaaggacctgttcgccgcctgcggcgagatgggcatgacccacatcgccatg
accgaccacggcaacctgcacggcgcctacgacttcttccaccaggccgccgccgccggc
gtcacgccgatcatcggcatcgaggcgtacgtggcgcccggcgcgcggcaggacaagcgc
aagatccggtgggggcagccgcaccagaagcgggacgacgtctccggctcgggcggctac
acgcacaagacgatctgggccaccgaccggaccggcctgcacaacctcttccggctctcc
tccgacgcctacgccgagggctggttgcagaagtggccgcgcaccgacagggagagcatc
gcccggtggtcgcgggggctcgtcgcctcgaccggctgcccctccggcgaggtccagacg
cggctgcgcctcggacaggacgccgaggcgctgcgcgcggcggccgagtaccaggacgtc
ttcggcaaggacgggtacttcctggagctgatggaccacggcatcgagatcgagcgccgc
gtccgcgacgggctcctcgacatcggccggaagctcggcatcccgccgctggtgaccaac
gactcgcactacacccgcgcggacgaggcgaccgcgcacgacgccctgctgtgcatccag
accggtaagaacctcaccgatcccgaccggttccggttcgacggcaccggctaccacctc
aagccggcggaggagatgtacgcgatcgactcctccgacgcctggcaggacggctgccgc
aacacggccctgatcgccgagcgggtcgacaccacgggctggttcgagaagcgcgacctg
atgccgcggttcgacgtccccgagggctataccgagatcacctggttccgggaggaggtc
gaggcggggctgcgccgccgcttcccgggagggctcggcgacgggtaccgcgagcaggcc
gagtacgagatggacgtcatcgtccagatggggttcccgggctacttcctggtggtcgcc
gacttcatcatgtgggccaagaccaacggcatcgcggtcggccccgggcgcggctcggcg
gccgggtcgctggtgtcgtacgcgatggggatcaccgacctcgacccgatcgagcacggg
ctgatcttcgagcggttcctcaaccccgagcgggtctccatgcccgacgtcgacatcgac
ttcgacgagcgccgccgcggcgaggtgatccggtacgtgaccgccaagtacggcgccgac
aaggtcgcgatgatcggcacctacggcaccatcaaggccaagaacgcggtcaaggactcg
gcccgggtgctcggccacccgtacgcgctgggcgaccggatcaccaaggcgatgccggcc
gacgccggcggcaagggcatcgacctgaacgggatcaccgacccgtcgcatccgcggtac
gccgaagcgggcgaggtccgcgcgatgtacgagggcgagccggacgtccggcaggtcatc
gacaccgccaagggcgtggaggggctggtccggcagatgggcgtgcacgcggccggcgtg
atcatgtccagcgagacgatcaccgatcacgtcccggtctgggtgcggcactccgacggc
gtcaccatcacccagtgggactacccgagctgcgaggcgctcggcctgctcaagatggac
ttcctcggcctgcgcaacctgaccatcatggacgacgcgatcgcgctgatcgagaagaac
accggcgtcgcgctcgacctgctcgccctgccgctggacgacccggagacctacgcgctg
ttcggccgcggcgacaccctcggggtgttccagttcgacggcggcgcgatgcgctcgctg
atgcggctgatgaagcccgacgggttcgaggacatcaccgccgtcaccgcgctgtaccgg
ccgggcccgatggggatgaactcgcacaccaactacgcgctccgcaagaacggccagcag
cagatcaccccgatccacccggacctggaggagccgctcagggacgtgctcggcctcacc
tacgggctggtcgtctaccaggagcaggtgcagaaggccgcccaggtcctcgccgggtac
acgctcggccaggccgacctgctgcgccgcgcgatgggcaagaagaagaaggaggtcctc
gacaaggagttcgtcccgttccgggacggctgccgtgagcggggctactccgacgaggcg
atccaggcggtgtgggacgtgctggtgccgttcgccggatacgcgttcaataaggcgcac
gccgcctgctacgcgctggtgtcgtactggaccgcgtacctgaaggccaaccatccggcc
gagtacatgtccgcgctgctgacctcggtgcgcgacgacaaggacaagtccgcggtgtac
ctgaacgagtgccgccacatgggcatcacggtgctgccgccgaacgtgaacgagtccgag
gccgacttcgccgcccagggcgacgacgtcatcctcttcggcctgaccgccgtgcggaac
gtcggccgcaacgtcgtcgacgcgatcatccggagccgcggggccggcggccggtacggc
tcgttccccgacttcctcgacaaggtcgacgcggtcgcctgcaacaagcgcgccgtcgag
tcgctgatcaaggccggggcgttcgacgagctcgggcacacccgcaagggcctcaccgcg
gcgttcgagccgatggtcgacgacgcggtgcgggtcaagcgccggcgggccgaggggcag
ttcgacctgttcgggaccctggccgagggggacggcggcgggccgggcggcgtgctggag
gcggccttcgccgcggacgagtgggacaaggcgcacctgctcgcgcaggagcgggagatg
ctcggcctgtacgtctccgaccatccgctgttcggcgtcgagcacgtcctgcgcgaggga
tcggacgcctcgatctcccagctcaccggcggcgagcacgccgacggcgcggtggtgacg
atcggcggcatcgtgtcgggcctccagcgcaagatgaccaagaagggcaacgcctgggcg
atcgcgaccgtcgaggacctggccggggcgatcgagtgcctgttcttccccgcggcctac
cagctcgtgtcggccctgctcgccgaggacaccgtggtgttcgtgaagggccggctggac
aagcgcgaggatgtgccgcgcctggtcgcgatggagctgaccgtccccgagctggacgcg
gcgggcgagggcgcgcccgtccggctggagatgcgggccgcgcgggtgacgccgcagtcg
gtcggtcagctcaaggagatcctccaggcgcacccgggacccgccgaggtgcagctctgg
gtgcgcggccggcacaagacgaccgtctaccggctcgccttccgggtcgacgcacgcccc
gggttctgggccgacctcaaggccgccatcgccgtgacccgcgccccgtga
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