Spirosoma pollinicola: CWM47_00045
Help
Entry
CWM47_00045 CDS
T05236
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spir03016
]
CWM47_00045
Enzymes [BR:
spir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CWM47_00045
Transfer RNA biogenesis [BR:
spir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CWM47_00045
Prokaryotic type
CWM47_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AUD00348
UniProt:
A0A2K8YRX4
LinkDB
All DBs
Position
5201..6169
Genome browser
AA seq
322 aa
AA seq
DB search
MPKPNALINQETDHARPANPVFSLTILGAGSATPTLRLHQTAQLLTIGSDYVLIDCGEGT
QLRLIEQRIRPGRLRYIFISHLHGDHYFGLAPLLSSLNMSGRTEDLYLFGPRGLDEVLTT
IFRVSDSRLNFRLHFQVVEPTTSALILDHPLMTVESIPLQHRIDCTGYLFREKPHKPHLL
REKLPADVPVTYLKQLKEGKDILGAEGEVIYAAADYTEPGPLPRSYAFCSDTRYVAELVP
QLQGVNLLYHEATFLDDNAQRAAEVYHSTAKQAATIAAKAGVGKLFIGHFSSRYKQFDLF
LDEARTIFPETYLADEGETTHI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcctaatgcattaattaatcaggaaacggaccatgcccgacccgcgaacccg
gtcttttccctcacaattttgggggcaggttcggctacgcccaccctacggctccaccaa
acggcgcagttgctaacaattggcagcgattatgtgctgattgactgtggagaaggcacg
cagttgcgtttgattgagcaacggatcaggccggggcggttacgctatattttcataagt
catctgcacggcgaccattattttggattggcaccactcctatcgagtctgaatatgagt
ggtcgaacagaagatttgtatctttttggtccgcgtggtctggacgaggtcttaacaacg
atctttcgagtatctgactcgcggcttaatttcaggctccatttccaagtcgtagagcca
actacatctgctctcattcttgatcatccgttaatgaccgtggaatcgattccactgcag
caccgaattgattgtaccggttatctttttcgggaaaaaccacacaaaccgcatttgctg
cgcgaaaaacttccggccgatgtaccggtaacttatctcaaacaattgaaggagggtaag
gacattctgggagctgagggtgaggttatttacgcagcagccgactatacagaaccagga
ccattgccccgctcctacgcattttgttcagatacacgctatgtggccgaattggtaccg
caattacagggtgtcaatttactttatcatgaagccacattcctggacgacaatgcccaa
cgagcagcggaagtctatcattctactgcgaagcaagcggctactattgcggctaaagct
ggggttggtaaactgtttattggtcacttctcgtcccgctataaacagtttgacttattt
ttagacgaagctcggacaattttcccggaaacgtatctggctgatgaaggtgaaacaacc
catatttaa
DBGET
integrated database retrieval system
