Spirosoma pollinicola: CWM47_01250
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Entry
CWM47_01250 CDS
T05236
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_01250
Transporters [BR:
spir02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWM47_01250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AUD00566
UniProt:
A0A2K8YSG4
LinkDB
All DBs
Position
complement(306777..308312)
Genome browser
AA seq
511 aa
AA seq
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MKYKLFSRFLPVLILVLLGACRQDFLIENNPNAIVTADYYKTENDVLLALNGVYQALRDN
NGIAENSGLFSEERSDNTGRNDNQSNAGEPFQFNAFALLPSNSYLQTHWNSLYQTITRAN
YVLAGSEMVTFAKPETKTQYQAEAKFIRALIYFTLVRKWGDVPLVTKPLTTTEEVTANTF
REKKETVYKQIVADLTDVINSPLPDVQAAANKGRVSKVAGNALLGQVYLTMATTLDQANR
NANLTQAKTFLTNAYSKRTFGLLKEIPYADVFDVSKKTTNPETIFQIVYKQGDINYSSSI
AANNQAQGETINSLRTTTGVGGNVTPDLVKEYEDGDVRKDYSIKYANAAVVKDYFVTKFR
DASSTAGTSGYGGNDWILMRYADVILMLAEVNLYLGDEATAIGFLDQVRERAKLPVYSIA
KTNPDYSAKFPTLKLAILHERRVELAFENQRWFDLLRFFTPTELVAYIRSKSQADFGAAQ
LTNFGTKDYYYPIPFNEVKLNPTGMYQNPGY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataaactattctctcgatttttaccagtgttgatactggttctgctgggcgca
tgccgtcaggatttcctgatcgaaaacaacccgaacgcgattgtaacggccgattattac
aagaccgaaaacgatgtgctgctggcgctgaacggcgtctatcaagccctccgcgataac
aacgggattgccgagaacagtggcctgttttcggaagaacgctccgataataccggtcgg
aatgataaccagtcaaacgccggagagccgtttcagtttaacgcctttgcgctcctgccc
agtaattcgtacctgcaaacgcactggaattccctttaccagacgatcacgcgggcaaat
tatgtgctggccggttctgagatggtaacctttgcgaagccggaaacaaaaacgcagtac
caggcggaagctaaattcatccgggcgctgatctattttacgctggttcgcaagtggggt
gacgtgcctttagtgaccaaaccccttaccacaacggaagaggttacggccaacacgttt
cgggagaaaaaagaaacggtatataagcagattgttgccgatttgacggacgtaataaac
agcccgctccccgatgttcaggccgctgccaataaaggccgggtttcgaaagtggctggt
aacgccctcctgggacaggtttatctgacgatggcaacaacactcgatcaggcaaaccga
aacgctaatctgacacaggcgaaaacctttctgaccaatgcctacagcaagcggacgttc
ggtttactgaaagagattccttacgcggatgtgttcgatgtgagtaagaaaacgaccaat
ccggaaacgatttttcagattgtttacaaacagggcgacatcaactattcgtcgagtata
gccgcaaataatcaggcacagggtgaaacgatcaattctcttcggacaacaacgggcgtt
gggggtaacgtaacccccgatctggtaaaagaatacgaagacggtgatgttcggaaggat
tactccatcaaatatgcgaacgcagcggtggtgaaagattatttcgtcaccaaatttcgg
gatgccagttcaaccgccggaacgagtggctatggcggcaatgactggattctgatgcgg
tatgccgatgttatcctgatgctggccgaagtaaatctgtatctgggcgacgaagcaacg
gctatcgggtttctggatcaggttcgggaacgggccaagttaccggtgtatagtattgcc
aaaaccaaccctgactacagtgctaaattcccaacgctcaaactggctatcctccacgaa
cggcgggttgaactggcttttgagaaccaacgctggtttgatctactacgcttctttaca
cccacggaactggttgcgtacatacgctcgaaaagccaggccgactttggggctgcccaa
ttaacgaacttcggaacgaaggattattactatccaatcccgttcaacgaagtaaaattg
aatccgaccggtatgtaccaaaacccgggttactga
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