Spirosoma pollinicola: CWM47_03255
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Entry
CWM47_03255 CDS
T05236
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spir03009
]
CWM47_03255
Enzymes [BR:
spir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CWM47_03255
Ribosome biogenesis [BR:
spir03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWM47_03255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
MTS
PrmA
Cons_hypoth95
TRAM
PCMT
Methyltransf_ANTKMT
Methyltransf_11
TRM5-TYW2_MTfase
UPF0020
Methyltransf_37
THUMP
PabTrmU54_TRAM_dom
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AUD00917
UniProt:
A0A2K8YTH8
LinkDB
All DBs
Position
complement(769517..770962)
Genome browser
AA seq
481 aa
AA seq
DB search
MRRKIHKIPERLAGVRIDAVAAEGKCIVRTEDGVIFVENPTGGPGVAPGDVVDLRITNTK
KQYREAVAERVQEWSPLRTEPFCEHFGTCGGCKWQHIQYPEQLGFKQQQVVDHLTRIGKV
GLPAILPILAASPTRYYRNKLEFTCAEGRWLTSTEVRTDEPMDQRAVGFHVPGRFDKVLP
INHCYLQPDPSNAIRLAVNEFVFQNGVTLYNLKLHTGYLRTLIIRTADTTQQVMVTLQVA
QDNPELLDALMNHLLVAFPQITSLNYILNTKKNDSYQDQEVVNWAGKGYIEEQMDAGNDQ
LLTFRVGPKSFYQTNAQQAYNLYKVAREFAGLTGQERVYDLYTGTGTIALFVARLAKHVV
GVEYVEASVADARVNAEVNGITNTTFVAGDMKDILTDDFFEKHGRPDVVITDPPRAGMDE
AVTRQLLKAAPQRIVYVSCNTATQARDLGILDEGYTVTSVQPVDMFPHTHHVENVVVLTK
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggaagattcataaaatacccgaacggttggctggcgttcgtattgatgccgtt
gccgccgaagggaagtgcatagtgcgtactgaggatggtgtcatttttgttgaaaatccc
accggcgggccgggcgtggcaccgggcgatgtggtcgatctacgcattaccaataccaaa
aagcaataccgcgaagccgttgccgagcgcgttcaggagtggtctcccttgcgaacggag
cctttttgcgaacactttggtacctgtggcggctgcaagtggcaacatattcagtatcct
gaacaactgggctttaaacagcagcaggtcgttgaccacctgacgcgtatcggtaaagta
gggttgccagctattctgcctatacttgcggccagccctacccggtattatcgtaataaa
ctggaatttacctgcgccgaaggtcgctggctgacttcgactgaagtgcgaaccgacgag
ccgatggatcagcgggcagtgggctttcacgtaccgggtcgtttcgataaggtgctgccc
attaaccactgctatctccagcccgacccatctaacgctatccggctggccgtgaatgag
tttgtttttcagaacggtgtcacgctgtataatctaaaattgcataccggctatctgcgg
acgcttattatccgcactgccgatactacgcagcaggtaatggtaacgttgcaggtggct
caggacaacccggagttgctggatgccctgatgaaccatttgctggttgcgttcccgcag
attacatcgctgaattacattctgaacaccaagaaaaacgacagctatcaggaccaggaa
gttgtcaattgggccggtaaggggtatatagaggagcagatggacgctggtaacgaccaa
ttgctaacctttcgggtcgggccgaagtcgttctaccaaaccaatgcgcaacaggcgtat
aacctgtataaagtggcacgggagtttgccggactaacagggcaggagcgggtctatgat
ctttataccggaaccgggactatcgctcttttcgtggctcgtctggccaagcacgttgtg
ggggtagaatatgtagaagcgtcggtggccgatgcccgtgttaatgccgaggtgaatgga
attaccaacacgacctttgtagcgggtgacatgaaagacattctaaccgatgactttttt
gagaagcatggtcgcccggatgttgttattaccgatccgccccgtgctggtatggatgag
gccgtaacgcgccaactgcttaaagcggctccccaacgaattgtctatgtaagttgtaac
acggccacgcaggcccgcgatctaggtatattagatgaaggctatacggtaacgagtgtg
cagcccgtcgatatgtttccccacacacaccacgtcgaaaacgttgtggtgttgacgaag
cggtag
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