Spirosoma pollinicola: CWM47_05155
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Entry
CWM47_05155 CDS
T05236
Name
(GenBank) RNA-binding protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spir03009
]
CWM47_05155
Enzymes [BR:
spir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CWM47_05155
Ribosome biogenesis [BR:
spir03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWM47_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AUD01250
UniProt:
A0A2K8YUE4
LinkDB
All DBs
Position
1182578..1184500
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AA seq
640 aa
AA seq
DB search
MSQDSEKNDRDAGQSRDGDPQRRDGRSFGRRDDARTSGPTGSRTNSNRGDDRPRFSRDND
RPKFNRPSDGDRPRFSRDNDRNSGPSEGASRDSGAPNRPFRPAGPRSDGPAGKPRFDRGQ
SDRPKFNRPADGDRPRFSKDRPKFDRPADGERPRFSRDNDRPKSSRPADNDRPRFNREDR
TYRPAGAGPRTNTPRTESDGPRTDGPTGAPRFNREDRPQRPDQRSRDTDSPRFPNDKGRS
TDRFGTDRPKRDDRREGDRPRIGRSDFPRDKDRRSDSGTGGSRFSRDNKRDGGAGRFDKP
AFKRVGGFSREADERNRFGSEDQPSGRRNDRPEDEERFTSKQRKDSGDRRTGNFTKAPNY
NLEQTRANDTFKRDRGDDQRHGKPSESESDKPKRQPSGDRNDGPGTTRLNRYIANSGVCS
RREADELIARGDISVNGKVINEMGYKVKEGDTVKYGTKSLTPERFVYVLLNKPKDYITTT
EDPEERKTVMELVADAGNFRMYPVGRLDRNTTGLLLVTNDGELADKLTHPSNNIRKIYQV
ELDKPFTEEHLEVVKKGLELEDGPIKPDAVSIVTPDGYVVGIEIHSGRNRIVRRIFESLG
YEVSKLDRTTYAGLTKKELPRGKWRFLDPKEVVKLKYLNS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagattcagaaaagaacgaccgggatgccggacaaagccgtgatggtgatccg
caacggcgggatggtcgttcattcggccgtcgcgatgacgcccgcaccagtggaccaacg
ggttcacgtaccaatagcaatcggggtgatgaccgtccccgttttagtcgggataacgac
cgccccaaattcaaccggcccagcgatggagaccgtccccgtttcagccgggataacgac
cgcaacagcggaccaagtgagggtgcttcccgagattcaggcgcaccgaaccggcctttc
agacccgccggaccacgtagcgacgggccagccggaaagccgcgtttcgaccgcggacag
agtgaccgccccaaatttaatcggcctgccgatggagatcgtcctcgtttcagtaaagac
cgtccaaaattcgaccggcctgctgatggtgaacgccctcggttcagccgcgataacgac
cgccccaaatccagccgccctgctgataatgaccgcccccggttcaaccgggaagatcgc
acgtatcgaccagccggagccggaccaagaactaatacaccacgcaccgaatctgatgga
ccacgtacagatggaccaacgggcgcaccgcgcttcaaccgcgaggaccgtccacaacgt
ccggaccaacgcagccgggataccgattctccacgtttcccgaacgataaaggacgcagc
accgaccgttttggtacagatcgcccaaaacgggatgaccgtcgtgaaggcgatcgtcca
cgtataggccggagtgattttccgcgtgataaagatcgtcggagtgactcgggtactggc
ggttcgcgtttttcgcgcgataacaaacgtgatggtggagcgggtcgattcgacaagcca
gccttcaaacgggtgggtggtttcagccgcgaggccgacgaacgcaaccggtttggtagc
gaagaccagcctagcggccgtcgtaacgaccgccccgaagacgaggaacgctttacgagc
aagcaacggaaagattccggcgaccgtcgcacgggaaactttaccaaagcaccaaattat
aatctggagcaaacccgcgccaatgatacctttaaacgggatcggggtgatgatcaacgt
catggtaagcccagcgaaagcgaatcggacaaaccaaaacgccagccatccggcgaccgt
aacgatggaccgggaacgacgcgtctgaaccggtacattgccaattcgggcgtttgttca
cgtcgggaagccgatgagttaattgcccgtggcgacatttcggtaaacggaaaagtcata
aacgaaatggggtataaagtgaaagaaggcgatacggttaagtatggcaccaagtcgctg
actcctgagcggttcgtatatgtattgctcaacaagccgaaagactatatcaccacaact
gaagaccccgaagagcgcaaaaccgttatggagttggtagccgatgcgggtaattttcgt
atgtatcctgtaggtcgtttagaccgcaacacaaccgggttgttactggtaacaaacgat
ggtgaactggccgataagctaacccatccatcgaacaatatccggaaaatctatcaggtt
gaactggataagccctttacggaagaacaccttgaggtcgttaaaaaaggtcttgaactc
gaagacggccccattaaacccgacgcggtgagcattgttacgcccgacgggtatgtcgtt
ggtatcgaaattcactcgggtcgcaaccgcatcgtgcgtcgcatattcgagagcctcggc
tacgaagtaagcaagcttgaccgcacgacttatgccggtttaactaagaaagagttaccc
cgtggcaaatggcgcttcctcgaccccaaagaggttgtgaagttgaaatatttgaactct
tag
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