Spirosoma pollinicola: CWM47_06440
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Entry
CWM47_06440 CDS
T05236
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spir03032
]
CWM47_06440
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_06440
Enzymes [BR:
spir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWM47_06440
DNA replication proteins [BR:
spir03032
]
Prokaryotic type
DNA Topoisomerases
CWM47_06440
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWM47_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4303
Motif
Other DBs
NCBI-ProteinID:
AUD01483
UniProt:
A0A2K8YV42
LinkDB
All DBs
Position
complement(1512193..1513290)
Genome browser
AA seq
365 aa
AA seq
DB search
MNLLELAHDPAETAKAARLVYMNDTMPGIKRQRNRDQFMYVDHTGNEVDDPDTLTRIRSL
ILPPAWENVWISPRVNGHLQATGIDTKNRKQYRYHAKWNAIRSQTKFFRMEAFGEALPLL
RERLTNDLKKRELTREKVIAIALSVMEQTLIRVGNAAYEKEYGSYGLTTLKDRHVKLEGQ
EARFSFKGKKGIYHDITLHDRRLSRLVKACREIPGKELFQYFDENGDRHPIDSGMVNAYL
HETMGDDFSAKDFRTWAGTVNALRLLAELEPCETEKELKKNVNTVLDQVSHQLGNTRTVC
RKHYVHPQVLEAYECQDLNPYIKQKARFKQTSPYGLDGIEKLLLKFLKDEIKTVVKSNKA
AKLVA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattggaattagcacacgacccagccgaaacggcaaaggcggctcgtctggtt
tatatgaatgacaccatgccgggcattaaacgtcagcggaatcgggatcaattcatgtat
gtcgaccacaccggcaacgaggtagatgaccctgacacgctgacgcgaattcgcagcctt
attttgccccctgcctgggaaaatgtctggatcagccccagggtgaatggtcacctacag
gcaacgggaatcgacacaaagaatcgaaaacagtaccgttaccatgcgaagtggaatgcg
atccggagtcagacaaagttctttcggatggaagcgtttggcgaggccctgcccctactg
cgcgaacgcctgacaaacgacttaaaaaagcgtgagttaacccgggagaaagtgattgcc
attgccctgagcgttatggaacaaacgctgattcgggtgggaaatgccgcctatgaaaaa
gaatatggctcgtatggcttgacaaccctgaaagacaggcatgtaaaactggaaggacag
gaagcccggtttagctttaaaggtaaaaaagggatttaccacgatatcacgctgcacgac
cgccggttatcccgtttggtgaaagcctgccgcgaaattcccggtaaagaattattccag
tattttgacgaaaacggcgaccgccatcctatagattctggcatggtgaatgcttatctg
cacgaaacgatgggcgatgatttctcggcaaaggatttccgcacctgggcaggtaccgtt
aatgctctccggctattagccgaattggaaccctgcgaaacggaaaaagaacttaaaaaa
aatgtgaatactgttttagatcaggtctctcatcaattggggaacacacgaaccgtttgc
cggaagcactatgttcacccacaggttttagaagcatatgagtgtcaagatcttaacccc
tacatcaaacagaaagcccgtttcaaacaaaccagcccatacggcttggatgggatcgag
aagttgttgctcaaatttctgaaagatgagatcaaaacagttgtaaagagcaataaagca
gcaaaattggtagcctga
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