Spirosoma pollinicola: CWM47_08390
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Entry
CWM47_08390 CDS
T05236
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_08390
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
TTR_TEN1-4
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AUD01833
UniProt:
A0A2K8YW56
LinkDB
All DBs
Position
1972088..1975324
Genome browser
AA seq
1078 aa
AA seq
DB search
MKKHLPPQFMFDRIIKGLTTQLLVAILCVSLTYAKSPFDRNPRTERPEATADRTLTGQVR
DEKNETLPGVSVILKGTQRGTVTDADGRYKLDVPDGGSTLVFSFVGYLTQEVRLGNQTSI
DISLKADSKVLDEIVVIGYGTAKKSDLTGAVSGVKEAELLERPAPSLNQQLSGRMPGVQV
NTNSGRPGGRTTIRIRGFSSINSSNNPLYVVDGVMLPQGTGDQFSNPIDYINPNDIVNVE
VLKDASSTAIYGARGANGVILVSTRKGKAGESRVTYDTQFSVNTIGPNKPQVLNAKEYLA
TEDLAYANMAKFDPVGWAAGKWTYLDPKVRRTAFSAAHPGVFDANLNPLYDTDWFKESAQ
SVLSQNHQLGFSGGNERTQYSLSLNYRDDQGLIKTSYMKRYSGRFSIDDQVKSWLKIGGT
LSYNNQSENLVDVNDAVARQIVEDFPFLPVRYPDTGVFAENRDYPYAEGTMSSVHRLMDR
KYIQNTQTILGSLFTNITFAKGLEMRTVLGTNIQTQEVNQSQTRTLNIGGNGNASTNNNR
TSFWSLENYLTYNKQFGQDHSFTGLLGLSWQETNTFGIGASVSGFATDYFGFNNLGAGAT
NPSVSSGASRFAFNSYFGRINYGYKNKYLFTATGRADGSSKFGENNKFAFFPSAALAWRI
SEEDFLKGNPIVSNMKLRASYGLTGNSEIPPYQSLSLLSSTYATIYNDGRVSGTGINRLA
NPDLKWEKTAQTDVGLEIGLFKGRVNVELDYYYRLTTDMLLDAPVPRTSGYATIRRNVGS
MQNRGFEFGLNTVNINKGTFSWNTTFNISLNRNKVLSLATPSDIFGVGGPNFTNQTNIIR
IGEPVGSFWGLTRAGVWSEAEREEAAKFTSYRNGLTILPGDIKYLDVNGDKAITDADRSI
IGNGSPKGWGAMTNNFRFGQFDATLELQYMFGNDVLLMNLHPSEDRQALANSYSSVLNAW
TPTNQGSQIAQVRDTRAGYVTNVDSHWVKDGSFLRGKNLLFGYTLPPAVTNKLKLNRLRV
YASAQNFFLLVKDPIIGDPEVTPTNQGTGDNNSAFSQGEIWHNYPKPTTYLLGLQIGL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacttaccacctcaattcatgttcgataggataattaaagggctaactact
cagcttttagtagctatactatgtgttagccttacctatgcgaagagtccgtttgaccgc
aatccacgtacagaacgtcccgaagccactgccgacagaacgctgacgggacaggtcaga
gatgagaaaaatgaaaccttacccggcgttagtgtcatcctgaagggtactcagcggggc
accgttaccgatgccgatggccgttataaattagatgtgcccgatggtggttctacactt
gtgttttcgtttgtcggttatctaacgcaggaggtacgccttggcaatcaaacatccatt
gatattagcctgaaagccgatagtaaagtattggacgaaattgtcgttatcggatacgga
accgccaaaaaatcagatttaacaggggcagtttcgggcgtaaaagaggctgagttgctt
gaacggcccgcgccttcactcaaccagcagctttcgggccgcatgcccggtgtgcaggtc
aacaccaactcgggtcgtccgggcggacgaacaaccattcgtattcggggatttagctcc
atcaactcctccaacaacccgctttacgttgtggatggtgtcatgcttccacagggaacc
ggcgaccagttcagtaacccaatcgactacatcaaccccaacgatatcgtcaatgtcgaa
gtattaaaagatgcttcatcgacggctatttacggggcacggggagccaacggcgttatt
ctggtatcgacccggaaaggaaaagcgggcgaaagccgggttacttacgacactcagttc
agcgtcaacaccatcgggcctaacaagccccaggtcttgaatgcaaaagaatatctggct
accgaagatcttgcctatgccaacatggccaaattcgatcccgtcggctgggccgccggc
aagtggacttatctggatcccaaggtgcgccggaccgctttcagtgccgctcaccctggt
gtgttcgatgccaatctgaatccattatacgatacggactggttcaaagaatcagcacag
agcgtactatcgcaaaaccatcaattaggattcagcggaggtaacgagcgcactcagtac
tcgctctcgctcaactaccgcgacgatcaagggctgatcaaaacgtcgtacatgaaacgt
tactcgggtcgcttctctattgacgatcaggtaaaaagctggcttaagatcgggggtaca
ctgagctacaacaaccagagtgaaaacctggtcgacgtcaatgacgccgtggcccgccag
attgttgaggactttccgttcctgcctgtacgctatcccgataccggtgtttttgccgaa
aaccgcgattatccatatgccgaaggaacgatgagttcggtccaccgcttaatggaccgc
aagtacattcagaatacgcaaaccattttgggtagcttatttacaaacatcacgtttgcg
aaagggctggaaatgcgcactgtactgggtaccaacatccagacccaggaagttaatcaa
tcgcaaacccgcacgctgaacatcggcggtaacggcaatgcatcgaccaacaacaaccgt
acgtcgttctggtcgctggaaaactacctgacctacaacaagcagttcggccaggaccac
tcgtttacagggctgctgggtctgtcgtggcaggaaaccaacacctttggcatcggtgcc
agtgtgagcggatttgctactgactattttggtttcaacaacctgggcgctggtgccacc
aacccatcggttagctcgggggcttcgcggttcgcgttcaactcgtacttcggacggatc
aactacggctacaaaaacaaatatctgtttacagctacggggcgggccgatggttcttct
aaattcggagagaacaacaaatttgcctttttcccctcagcggctctggcctggcggatc
tcggaagaagacttcctgaagggtaatccgatcgtctcgaacatgaaacttcgtgctagc
tatggcctgacagggaactcggaaattcccccttatcagtcgctgtcgttgcttagctct
acctacgctaccatctacaatgacggacgtgttagtggaacggggatcaaccgcttggcc
aaccctgatttgaaatgggagaaaacggctcagaccgacgtaggtctggagattggtctg
ttcaaagggcgggttaatgtagaacttgattactactatcgcttaaccaccgacatgctc
cttgatgcacctgttccacgcaccagcggctatgctactattcgccggaatgtaggatcg
atgcaaaatagaggctttgaatttggcctcaacacggtaaacattaacaagggtactttt
agctggaacacaacctttaacatctcgctgaaccgcaataaagtattgtcgctggctaca
ccatccgatatcttcggcgtagggggaccaaacttcacgaaccagaccaatattattcgg
attggtgagccagtaggttcattctggggcttaacccgcgcaggtgtgtggagcgaagct
gaacgcgaagaagcagccaagttcaccagctaccgcaatggtctgaccattctgcccggc
gacatcaagtacctggatgttaacggcgacaaggccatcaccgatgccgaccgcagcatc
attggcaacggcagtccaaaaggctggggggccatgaccaacaatttccgctttggccag
ttcgacgctacacttgaactacagtacatgttcggtaacgatgtattgctcatgaacctg
caccctagtgaagaccggcaggcgctggcaaacagctactcatcggtactcaatgcctgg
acaccaaccaaccagggaagccagattgcccaggttcgggatacacgtgcgggctacgtg
accaacgtcgatagccactgggtaaaggatggatcattcctacggggtaaaaatttactg
tttggttacaccttaccccctgcggttacgaacaagttgaagctaaaccggctccgcgta
tatgcttctgcgcaaaatttcttcctgcttgtgaaagatcctattattggcgacccagag
gtgacgcctaccaatcagggtaccggggataataatagcgccttctcgcagggtgaaatc
tggcacaactacccaaaaccaactacgtacctgctaggtctccaaatcggattataa
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