Spirosoma pollinicola: CWM47_10640
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Entry
CWM47_10640 CDS
T05236
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_10640
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
MetallophosN
PolC_DP2_central
Motif
Other DBs
NCBI-ProteinID:
AUD02241
UniProt:
A0A2K8YX83
LinkDB
All DBs
Position
complement(2499271..2502315)
Genome browser
AA seq
1014 aa
AA seq
DB search
MKSILYLRTTVGLMSLMLLSLIGLAQSPRITTITGRVTDSGTNEGLPGANVVVKGAQQGT
TTNANGQYSLTVSDGNATLTFSSIGYVTQEVALSNRSTIDIALKADDRSLNEVVVVGYGT
QRKIETTGSIASIKAADLVQTPVVNVAQGIQARVAGVQIVQNSGAPGGNVSVRIRGTNSI
NGTSEPLYIVDGIQISNGGGLTDISPLSTINPNDIESVEVLKDASATAIYGSRAANGVVL
ITTKRGKSGKTSVSYESYYGVQKVSKTIPVLNAAQFAQLENEAFKNNYYPDPASLGQGVN
WQSLVFRQAPIQNHQLTINGGSEKTQLALSLNYFNQEGVIINSGFERYSLRLNVDHRVSD
RIKIGTSILGSYSINKGVPYGTTSLGDGDFITSSIIGSALGAPPNLQPYRADGSLFPFGE
QANGQYREVTNPLGLAAIKNQIGIQRTLANLYGEVNLAQGLTYRASFNVDIQNSLRNTYS
PRAIVNAADLNDNSGSGAKINANSLVLLHESILTYTRTIAQHHTLKFTGVFGTQSNLANG
NTINATGFPNDATENEALQLALTRTVSSSRTKERLDSYLGRLNYGFKDKYFLDLTARADG
SSKFGANHKYGFFPAVSAAWRIIEEPFLKSVGWLSDLKLRASYGLTGNAGGINPYQSLAT
VSSSGSDYQFNHVYLTGINPSGIANPDLRWEKSTQANIGLDISLLNNRLSFVVDAYSKKT
RDLLYIKTLPLSSGYGSITGNFASLENKGIELATNARILQGPLRWDVSANATINRNKVLD
LDGGTTQERFVTTYSILSVGQPLGLFKTYVFDGINQTGETILPGYDGRLGGHKVKDLNGD
GTISAADQTVTGNPNPKFIFGFSTNLAYKNFDLSGFFSGSQGNDIFNQARFAFETPLGQR
NLYAGVVNRWSPTNPSQEYASAALSSRLPVSNRFVEDGSYLRCKNVTLGYTLPRIKGIQR
IRVYASGNNLFTLTNYTGFDPEVNTYGGSNTVIGVDNLVYPPARSFLGGLQVTF
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctattctatatttacgaacaacggttggcttgatgagcctgatgctactctcc
ttaataggactagcacagtcgccccgaatcactaccattacagggcgggtcaccgactct
ggaacgaacgaaggactgccgggtgctaatgttgttgtgaaaggcgctcaacagggtaca
acgacgaatgcgaatggccagtactccttaacggtgtccgacggcaatgccacgctcacg
ttctcgtccatcggctatgtaacacaagaggtagccctttcgaatcggagtactatcgac
atcgccctgaaagccgacgaccggtcgttgaatgaagtcgttgtggtagggtatggaacg
cagcgaaaaattgaaacgactggctccattgcgtccattaaagctgccgatctggtacaa
acgcccgttgtcaacgtggcgcagggcatacaggcacgggtagccggggtgcagattgtg
cagaattcgggggcaccgggcggcaatgtcagcgttcgaattcggggaacgaactcgata
aatggcacatccgagccgctctacattgtggatggcatccagatttcgaacgggggcggt
ttgacggacatcagccccctgtcaacgattaaccccaacgacattgagtcggtcgaagta
ctgaaagatgcctccgcaacagctatttacggctcacgagcggctaatggcgttgtgctg
attaccaccaaacggggtaaatcaggcaaaaccagcgttagttacgaaagctactacggc
gttcagaaagtctcaaaaacgatacccgttctgaatgcagcccagtttgcgcaactggaa
aacgaagcattcaaaaacaattattatcccgatccggctagtctgggtcaaggcgtaaac
tggcagagtcttgttttccgtcaagctcccatccaaaaccaccagttaaccatcaacggt
gggtcggagaaaacacaactggcgttgtcgctcaattactttaatcaggaaggcgtcatc
atcaactccggttttgaacggtactcgctccggctcaacgtcgaccatcgggtaagtgac
cggattaaaatcggcacgagtattctgggtagttactccattaacaaaggtgttccctac
ggtactacgagccttggcgacggcgattttattaccagcagcattattgggtctgccctg
ggtgctcccccgaatttacagccttatcgcgccgacggtagtctatttccctttggcgaa
caggcaaatggccagtatcgggaagtaacgaacccgctgggactggcggccatcaaaaac
cagattggcattcagcgcacactggccaatctatatggagaagtcaatctggcgcaggga
ctgacctatcgggcatcgtttaatgtcgatatccagaatagccttcgaaatacgtactcg
ccccgcgccatcgtgaacgcggccgacctcaacgacaactccggctccggtgctaaaata
aacgccaacagcctggtactgcttcacgaaagcatcctgacctatacacgaaccattgcc
cagcatcatacgcttaagttcaccggtgtgtttggcacgcaaagcaacctcgccaacggc
aacaccatcaacgccacgggttttccgaacgatgccaccgagaacgaggctctgcaactg
gccctaacgcgcacggtaagcagcagccgaaccaaagagcggctggactcgtacctcggc
cgactaaattacggtttcaaagacaagtattttctggatttgacggcccgcgccgatggg
tcgagcaagttcggagcaaaccataagtatggattcttcccggccgtgtcagccgcatgg
cgcatcatcgaagagccgtttctgaaaagcgtcggctggctgtcggacctgaaattacgg
gccagctacggactgaccggcaatgctggtggtatcaacccctatcaatccctggcaacg
gtatcatcgtcgggcagcgattatcagttcaaccatgtgtacctgacgggcatcaaccca
tcgggcattgccaaccccgatttacgttgggagaaatcgacacaggcgaacatcggcctg
gacattagcctgctcaacaaccgtctgagttttgtggtcgacgcctacagcaaaaagacc
cgcgatctgctttatatcaaaaccctgccactctcatcgggctacggcagtattaccggc
aattttgcctcgctggaaaacaaaggaattgaactggccaccaacgcccggattttacag
gggccgctgcgctgggatgtgtcggctaacgcgactataaatcgaaacaaagttctcgac
ctcgacggcggcactacgcaggaacggtttgtgacaacctacagcattctgagtgtcggg
caaccgctgggtctgtttaaaacctacgttttcgacggcatcaaccaaacaggcgaaacc
attttgcccggctacgatggtcggttaggcgggcataaagtgaaagatctcaacggcgac
ggcactatctccgcagccgatcagacagtaacgggcaatccaaacccgaaatttattttc
ggcttttcaactaatctggcttataaaaacttcgatctgagcggctttttctcgggtagt
cagggcaacgatattttcaatcaggcgcggtttgccttcgaaacgccactgggtcagcgt
aacctgtatgcgggtgtggtcaatcgctggtcgcccaccaaccccagtcaggagtatgcc
agtgcggccctgagcagccgcttgccagtcagcaaccgatttgtggaagatggctcgtac
ctgcgctgcaaaaacgtaacgctgggctacacgctacccagaatcaaaggcattcagcgc
attcgggtatatgccagcggcaacaacctcttcacgcttaccaactacacaggcttcgat
cccgaagtgaacacctacggaggcagcaacacggtcattggcgtcgataacttagtctat
ccccctgcccggtcgtttctgggtggtttacaggtcactttctag
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