Spirosoma pollinicola: CWM47_11600
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Entry
CWM47_11600 CDS
T05236
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_11600
Transporters [BR:
spir02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWM47_11600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AUD02413
UniProt:
A0A2K8YXR6
LinkDB
All DBs
Position
2756558..2758036
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AA seq
492 aa
AA seq
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MKQINIKLLLGCSALMLAGQSCTDLTETTYDVIPTSGTFGSTPNQAAALIGPLYNGLGEY
WGNMSNLNTTTDEQIVPTRGGDWKDGDNWKRLYTHTWDPITDNGQFNGPWTWCYNNITSI
NQQLGTITDANTKAELRALRAFFHYQAMDLFGNVIISDAVTAATPKQNTRAEVFAFVEKE
LLAVYPNLSDVSGGAYYGRMNKYVADMILAKLYLNAQVYTGTPRWADAITRCDNLIKSGK
FQISGDYLSNFAVQNQNSPETILATPFDKSKRGGFHPQMQGLHYLNQLTYNIGTAPWNGF
ATVTEFYNSFDAKDLRKKQWLVGQQYKADGTPLKDDALDMVFRPEVESFVFDAGANGRLA
GARSQKYEIQKNNSFTEQDNDFVVYRLADVYLMRAEANMRLGNMGAALPDLNVIRARAGM
PAYTTITLDELLAERGRELAWEYHRRQDLIRFGQFGKAWRFKDAEADNHRTLFPIPKDQL
SLNPNLKQNPGY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataaatataaaattgcttctgggctgttcggcgctgatgctggcaggccaa
tcctgtaccgatctgacggaaacaacctatgacgttattccaaccagtggtacgtttggt
agtactcccaatcaggctgctgctttgattggcccgctttataatggtctgggtgaatat
tggggaaacatgtccaacctgaacacaactacggatgagcagatcgtgccaacccgtggt
ggtgactggaaagatggagacaactggaaacggttatatacccatacctgggatcctatt
acagacaatggtcagtttaatggcccctggacctggtgctacaacaacatcaccagtatc
aaccagcagttaggcaccattactgatgccaatacgaaagctgagctacgggcactacgg
gcattttttcactaccaggcaatggatttgtttggcaatgtgattatctccgatgctgtt
accgctgctacgcctaagcaaaacacacgggcagaggtattcgccttcgttgagaaggag
ttactggcagtttatccaaacctgagtgatgtatcgggtggcgcgtattatggccggatg
aacaagtatgtagccgacatgattctggctaaactgtacctgaatgcacaggtttacacg
ggtactccccgttgggctgacgcgatcacacggtgcgataacctcatcaaatcgggtaaa
tttcagatttccggtgattacctgagcaactttgctgttcagaaccagaactcaccagaa
acgattctggcaacgccattcgacaagtcgaaacggggtggatttcacccacagatgcag
ggactccactacctgaaccaattgacatacaatattggtacagctccctggaatggattt
gctacagtaacggagttttataactcattcgacgctaaagatttgcgtaagaagcagtgg
cttgttggtcagcagtacaaagctgatggtacacctttgaaagatgacgctttggacatg
gtattccgcccagaagttgagtcgttcgtttttgatgccggtgctaatggccgtttggcc
ggtgctcgtagtcagaagtacgaaattcagaaaaacaactcgtttacagagcaggataac
gatttcgtcgtctaccgtttggctgacgtgtatctgatgcgggcagaagccaacatgcgc
ttgggtaatatgggtgctgccctgcctgacttgaatgtgattcgtgcccgtgccggtatg
cctgcctatacaaccattacgctggatgagttattggcagagcgtggtcgtgagctggca
tgggaataccaccgtcgtcaggatttgatccgttttgggcagtttggaaaagcatggcgt
ttcaaagatgctgaggctgacaatcatcggacactgttcccaattccgaaggatcagcta
tcgttgaacccgaatttgaagcagaatccaggctattaa
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