Spirosoma pollinicola: CWM47_12140
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Entry
CWM47_12140 CDS
T05236
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
spir
Spirosoma pollinicola
Pathway
spir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CWM47_12140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_12140
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CWM47_12140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AUD02512
UniProt:
A0A2K8YY14
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Position
complement(2886892..2889537)
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AA seq
881 aa
AA seq
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MKSTTAAKPQVKKNETPLNRQYNQIKAKYPGALLLFRVGDFYETFGEDAVRASKILGITL
TKRNNGGSNEELAGFPHHSLDTHLPKLVRAGERVAICDQLEDPSVAKGIVRRGVTELVTP
GVSFNDNVLDTRRNNYLAAVHFGKTDDTFGISFLDISTGEFLASQGNSAYVDKLLQSFNP
SEVLYCKRNRQEFGSLFGDKFHTYTLEDWAFTYDFGYNFLKQHFQTTSLKGFGIEGMPDG
IIAAGVILHYLNETEHKDLQHITRVTRLEEDRYVWLDRFTIRNLELTVAQQEGGVPLIQI
LDQTVTPMGARLLRKWLNLPLKEKALIDERLNMVELLVGDTDLADTLMNHLKQIGDLERL
VSKVAVRRISPRELLQLKRSLQHVLPIKELLITALSQKESPSLKKYADQLNPVSFLLDRI
ETELREDPPTLSNQGGIIKQGINAELDELTAIAYSGKDYLLQLQEREVQRTGISSLKIAY
NKVFGYYLEVTHAHKTRVPEEWIRKQTLVNAERYITPELKEYEDKILNAEEQIFQIEARM
FNDMVIAAGEYVGAIQQNARVLSVLDVLASFGRVAVKNKYVRPAINESKVLNIKDGRHPV
IEQQLPPGEPYIPNDVYLDDQTQQIIIITGPNMAGKSALLRQTALIVLMAQSGSFVPASS
ADIGLVDKIFTRVGASDNLSRGESTFMVEMTETASILNNLSERSLILMDEIGRGTSTYDG
VSIAWSITEYLHNKTDCRPKTLFATHYHELNDLAADNPRIKNYNVSVKELGNKVIFLRKL
KEGGSEHSFGIHVAQMAGMPAQIVSRANEILKQLESSHQRETNRENIQKAVPQERELALR
IIESGDPKSEAIKEKLRAIDINRLTPIEALLRLNELLKMAE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgaccaccgcagcaaagccacaagttaagaaaaacgaaacgcccctcaaccgc
caatataaccagatcaaagccaaatatcccggtgcgttgctgctctttcgtgttggtgat
ttctatgaaacctttggcgaagatgccgttcgggccagcaagattctgggcattacgctt
accaaacgaaacaacggcggatcgaacgaagaactggccgggtttccccaccactcgctt
gatacccacttgcctaaactcgttcgggcgggcgaacgcgtcgctatctgcgatcagtta
gaggacccatcggtagcgaaaggcattgttcggcggggtgttacggaactagtgaccccc
ggtgtttcatttaatgacaatgtgctcgacacccggcgcaacaactaccttgccgctgtt
cacttcggcaaaacagacgatacattcggtatctcattcctggatatttcgacgggcgaa
tttctggcctcgcagggtaattcggcttacgtcgataaactgctgcaaagtttcaaccca
tcggaagttctgtactgcaaacgtaatcggcaggagttcggcagtttattcggcgataaa
tttcatacatacaccctcgaggactgggccttcacctacgactttgggtacaatttcctg
aaacagcattttcagaccacttcgctcaaagggttcggtattgagggcatgcccgatggg
attatcgcggctggtgtgattctgcattacctcaacgaaacggagcataaagaccttcag
cacataacccgcgttacccggcttgaagaagatcgctacgtgtggctcgaccgattcacc
atccgtaatcttgaactgacggtcgcccagcaggagggaggtgtgcccctgattcagatc
ctcgaccagaccgtaacgccaatgggcgcacgcttgctacgtaaatggctcaacttgcca
ctcaaggaaaaagccctgatcgacgagcgtttgaatatggtcgagttattggttggcgat
actgatttagccgacacgctgatgaatcacctgaagcaaattggtgatctggaacggctg
gtttctaaagtggctgttcggcgtatcagcccgcgtgagttgctgcaattgaaacggtcg
cttcaacatgtgctgccgattaaagaactattgattacggcgctgagccaaaaggagtcg
ccttcattaaagaaatatgccgatcaactcaacccggtttcgtttctgctcgaccggatt
gaaacggaactgcgcgaagatcccccaacactctcaaaccagggcggaattattaaacag
ggcattaacgcagagttagatgaactgaccgccattgcgtattcggggaaagattatttg
cttcaattgcaggagcgcgaagtacaacggacgggtatttcgtcactcaaaatagcctat
aacaaagtgtttggttattacttagaggttacgcacgcccataaaacccgtgtgcccgaa
gagtggattcgaaagcagacgctggtaaatgccgaacgctacattacgcccgaactgaaa
gaatacgaagataaaatcctgaacgccgaggaacagattttccagatcgaagcccggatg
ttcaacgatatggtaattgccgctggtgagtatgtgggggctattcaacagaacgcccgc
gtattgtcggtgctggacgtactggcttcgtttggccgtgttgctgtcaagaacaaatac
gttcggccggccattaacgaaagcaaagtgctgaacatcaaagatggtcggcacccggtt
attgaacagcagttgccccccggcgagccgtatatcccgaacgatgtttacctggatgac
cagacccagcagatcatcattattaccgggccgaacatggcgggtaaatcagctttgctg
cggcaaacggccctgattgtgctgatggcgcagtcgggtagttttgtcccggcatcgtcg
gcagacattgggttggtcgacaagatatttacgcgtgtgggcgcgtctgacaacctctcg
cggggcgaaagtacgttcatggttgaaatgaccgaaacggccagtattctcaacaacctg
agcgaacgaagcctgattttgatggacgaaattggccgggggaccagtacgtacgacggc
gtttccattgcctggtccatcaccgaatacctgcacaacaaaaccgactgccgtcctaaa
acgctgtttgccacgcactatcacgaactaaacgatctggctgccgataacccacgcatc
aaaaattacaatgtgtcggtgaaagagctgggcaacaaagtgatttttctgcggaagctg
aaagaaggcggttcggaacacagtttcgggattcacgtagcgcagatggccggaatgcct
gcccagattgtgagtcgggccaatgagattttaaaacaactggagtcgtcgcaccaacgc
gaaactaaccgggaaaacattcaaaaggccgtgcctcaggaacgggaattagcccttcgc
atcatcgaatccggcgaccccaaatccgaagcgatcaaggagaaactacgcgccatcgac
ataaatcggctaacacctattgaagcgctgctgcgattgaatgagttgctgaaaatggcg
gagtag
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