Spirosoma pollinicola: CWM47_12845
Help
Entry
CWM47_12845 CDS
T05236
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_12845
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
MetallophosN
DUF4170
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AUD02644
UniProt:
A0A2K8YYI9
LinkDB
All DBs
Position
complement(3070489..3073671)
Genome browser
AA seq
1060 aa
AA seq
DB search
MKKLYQVVSFSILVGSFSGFVYGQGTDTRRVNTSSSASQLITLNHSERQATHVTSRFAEV
IVAGKVIDEKGAGLPGVSVVVKGTTQGSTTDGEGRYRISAPNANATLVFSFVGYQKQEIL
VGNQTSLTVTLLPDDQTLNEVVVVGYGSQRRQDITSAVSVINMKDIGEQPANNPNQILQG
RAPGVVVKQKSGTPGGAFEVRVRGIGSLGAGSNPLYVIDGFAVGTSVGQNLNPNDIESVT
VLKDAASTAIYGARGSNGVVLITTKQAKDGKVNVNLSMDYGIQSVPNSRRVKMLNGVEFA
QFKKDIFMDQIRILQNREPAESEVPIGYRFPEQTKYSTDWFGLIMRDNAPYSDLNLTVSS
GAGPIKSLLSVGYYKEDGIIKKTNYDRISVRSNLGGQINKFINVGLNINGTYTRQNLANT
DGRSALVGGALLMDPRATPYNPDGSLVPYINGVDGVFGFPNPLFVLENVYRKRNIADLLT
NGFIELSFLRNFKFRTSANVKLNNNTFKEYIPSTIGNPVASGTAGAPPRIATETDNTEEL
TNYSLDQLLTYKPQLSANHSLDVLLGYTAQQEKVRGFTGTGNTYPDDLVPYLGSASIRSA
TSYEFGWSMLALLSRVNYAYKDKYLFSASYRREGSSRFGAKNKYGDFPAASIGWRLTEES
FMPKTAWLSDLKLRASWGVTGNNDIGNYPSLAFVGANNYILGNAFSAGKVVSSFANSELK
WEKSNQLDIGMDLALFNSKLIFNIEYYKKITNDMLLPVSIPSVSGFTTSLANIGKVENHG
VEIGGEFRTTIGQVNFRTNANISFNRNRILAIKGASDALYYGSFYGGYNVQKVGRPVGMI
YGYNKLGIFNTQAEIDAAPKQDGVIPGGMKFEDTNRDGVISYDTQDMVEIGNPNPAFTWA
WTFAADYKKFDLNLMFLGAQDFDIYRNIEASTMNMDGVFNVLDKAKDRWRSASNPGTNPA
DVHSQGGTSYFKWSRESSNRYVYDGSYVWLKTITIGYNFPKFKSILSNARVFVTGNNLIM
FTKYPGNNPDAGVRSTTEPNNDDESYPVPRTFATGIKLNF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctttatcaagtagtttcatttagtattttggtcggcagtttttctggcttt
gtctacgggcaggggacggatacacggagagttaatacatcatccagcgcatctcagttg
attacgctgaatcattcagaacgtcaggctacacacgtgacctcaagatttgccgaggta
atcgtggcgggaaaagtgattgatgagaaaggtgccgggttgccgggcgtaagtgtagtc
gtaaaaggaacaacgcagggctcaaccaccgatggagagggacgctatcgtatctcggca
cccaacgccaatgctaccctggtttttagttttgttggttaccagaaacaggaaattctg
gtagggaatcagacgtcgctgaccgttacgctgctaccggatgaccaaacgctgaatgaa
gtggtggtagtaggctacggttcgcaacgccgacaggatattacctcggcggtatcagtc
atcaacatgaaagatattggcgaacaacctgccaacaacccgaaccagattcttcaggga
cgtgcgccgggagttgttgtcaaacaaaaaagcggtacgccgggtggtgcttttgaggta
cgtgttcggggtattggctcactgggggctggtagtaatccgctctatgttatcgacggg
ttcgccgtgggtacgtcggtcggacaaaacttaaatccaaacgatatagaaagtgtaaca
gtcctgaaagatgccgcatctacggctatttacggtgccagagggtcgaatggtgtggta
ctcatcaccacaaaacaggccaaagatggaaaagtgaacgtcaatctgtcgatggattat
ggtattcagagcgttcccaattcccgtcgggtaaaaatgctgaacggggtggagttcgct
caattcaaaaaagacattttcatggatcagatccgtattcttcagaatcgggagcctgcc
gaaagtgaagtacccatcgggtatcggtttccggaacagaccaagtattcgacagattgg
ttcggccttatcatgcgcgacaatgcaccctattccgatcttaatttaacggtttcgtcg
ggggccgggcctatcaaatcgttattgtcggtggggtattataaggaagacgggatcatt
aaaaaaacgaattacgaccgtatttccgttcgctccaatctgggcggacagatcaataaa
tttatcaatgtcggtctgaatatcaacgggacctatacccggcaaaacctggcgaatacc
gatggccgtagcgccctcgtaggaggtgccttgttgatggacccccgcgctacaccctac
aatcctgatggctcacttgtgccctacataaacggcgtcgatggtgtatttgggtttcct
aatccgctatttgtactggaaaatgtgtatcggaagcggaacatcgccgatttgctgacg
aatgggtttattgaactttccttccttcggaatttcaagtttagaacgtctgcgaatgtc
aaactcaataacaatacattcaaggagtacatcccctccactattggcaacccggtagca
tccggaacggcgggtgctcctccacggatcgctaccgaaaccgataatacagaagaactg
accaactattcgctggatcagttactgacctacaaaccccagctatcagcgaaccatagt
ctggatgtgctgcttggctacaccgctcaacaggagaaagttcgcgggtttacgggcact
ggcaatacctaccccgatgacctggtgccttaccttggctctgcttccattcggtcggct
acgtcctacgagtttggctggagtatgctggctttactcagtcgggtcaactatgcttac
aaggacaaatacctgttttcggcttcgtatcggcgggaggggagttcgcgttttggggcc
aagaacaagtacggcgattttccggcggcttctattggctggcggcttacagaagagtcc
tttatgccgaaaacagcctggttgagcgatcttaaactacgggcaagttggggtgtaacg
ggcaataatgacattggtaactacccgagcctggcattcgtaggcgctaacaactacata
ttgggcaatgcattttcggcgggtaaagtcgttagctcctttgccaattcggagttgaaa
tgggaaaaatcgaatcaactggatattggaatggacttggctctgttcaacagcaagttg
atttttaacatcgagtattataagaagattaccaacgatatgcttttgccggtgtccatc
ccgtcggtttcgggctttacaaccagcctggctaatattggtaaagtggagaatcacggc
gttgaaattggcggggaatttcgaacgaccatcgggcaggtcaatttccgcaccaatgcc
aacatcagtttcaaccgaaatcggattctggccattaaaggagccagcgacgcactgtat
tatggtagtttttatggcggctacaatgtgcagaaagtgggtcgcccggtgggcatgatt
tacggctacaacaaattgggtattttcaatacacaagctgaaatcgacgcagcgcccaaa
caggacggcgtcattcctggcggtatgaaattcgaggataccaaccgcgatggggttatt
tcctacgatacgcaggatatggtcgaaataggcaatccaaatccggcatttacctgggcc
tggacgtttgccgccgattataaaaagttcgacttaaatcttatgtttcttggcgctcag
gactttgacatctaccgaaatatcgaagcctcaactatgaatatggatggcgtattcaat
gtgctggacaaagcaaaagatcgctggcggtcggcaagtaatcccggcacaaacccggct
gatgtgcattcgcagggtggaacgagctatttcaaatggtcgcgggagagcagcaatcgc
tatgtgtatgatggcagctatgtctggctgaaaaccattacgattggctataactttcca
aagttcaagtcgattctgagcaacgcccgggttttcgtgacgggcaacaacttgatcatg
ttcaccaaatatccgggcaataatccagatgcgggcgtacgaagcacaaccgaaccgaac
aatgacgacgagtcatatccggttcccagaacgtttgctacgggtataaaactcaacttc
taa
DBGET
integrated database retrieval system
