Spirosoma pollinicola: CWM47_14715
Help
Entry
CWM47_14715 CDS
T05236
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spir
Spirosoma pollinicola
Pathway
spir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWM47_14715 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spir03019
]
CWM47_14715 (pnp)
03016 Transfer RNA biogenesis [BR:
spir03016
]
CWM47_14715 (pnp)
Enzymes [BR:
spir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CWM47_14715 (pnp)
Messenger RNA biogenesis [BR:
spir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CWM47_14715 (pnp)
Transfer RNA biogenesis [BR:
spir03016
]
Prokaryotic type
tRNA degradation factors
CWM47_14715 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_2
KH-I_KHDC4-BBP
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AUD02977
UniProt:
A0A2K8YZB6
LinkDB
All DBs
Position
complement(3539669..3541795)
Genome browser
AA seq
708 aa
AA seq
DB search
MFEITTQSVALPDGREITIETGKLARQADGAVVVRLGDTMLLATVVSSKDAKEGVDFLPL
SVDYQEKFASAGRIPGSFQRREGRLGDHEILISRLVDRALRPIFPDNYHADTQVMITLIS
ADPEVQPDALAALAASSALAVSNIPFNGPISEVRVAKIDGQYKINPKTSELERATIDLIV
AATSKDICMVEGEMNECSEAEVVEAIKAAHEAIKLQCQAQKELEAKVGKTEKREYNHETH
DEVLRAAVRAATYDKIYAVALQQNPSKKGRSDGFKAVRDEYLASFAEGEEVNVSLIKTYF
HDLEWEASRRLVLDERTRLDGRKLDQIRQISAEVGYLPGPHGSALFTRGETQSLTTVTLG
TKTDEQIVDQTMYQGYSKFLLHYNFPGFSTGEVKPNRGAGRREIGHGNLAHRSLKKVLPP
AEENPYTIRIVSDILESNGSSSMATVCAGTMALMDAGIKIKAPVAGIAMGLISDGDKYAV
LSDILGDEDHLGDMDFKVTGTTKGIVACQMDLKVDGLSYEVLAQALEQARLGRLHILGEM
MKGIADVRSDLKPHAPRAMVIKIDTNQIGAVIGPGGKVVQDIQKDSGAVVNIDEHDNAGW
VSIFATSKESMDKAVSRVKGIVAVPEVGETYVGKVKTIQPFGAFVEFMPGKDGLLHISEI
KWERLETMDGVLQVGEEITVKLIDVDKKTGKYRLSRKVLLPKPENKIA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatcaccacgcaatccgttgcgctgcccgacgggcgggaaattaccatcgaa
accggaaaactggcccgtcaggccgacggtgcggtggttgtacggttaggcgacaccatg
ctgttggcaaccgttgtatcaagtaaagatgccaaagaaggcgtcgacttccttccttta
tctgttgattaccaggaaaaatttgcttcggctggccggattccgggaagcttccaacgt
cgcgaaggtcgcctgggtgatcacgaaatcctcattagccgtttagtagaccgcgccctg
cggcctattttccctgataattaccatgccgatacgcaggtgatgatcacgttgatttcg
gcagatcccgaagtgcaacctgatgcattggctgcattggctgcttcatcggccctggcc
gtgtcgaatatcccgttcaacgggccaatctccgaagtacgcgttgccaaaatcgatggt
cagtataagatcaacccaaaaacatcggaactggaacgcgctacaatcgacctgattgtg
gctgctaccagcaaagacatttgtatggtagaaggcgaaatgaacgaatgttcagaagcc
gaagtcgtggaagcaattaaagctgctcacgaagccatcaagcttcagtgccaggcgcag
aaagaactggaagcaaaggttggtaaaaccgaaaagcgtgaatacaatcacgaaacgcac
gacgaagtacttcgtgctgccgttcgtgccgctacctacgataaaatttatgccgttgcc
ctccagcagaacccaagcaaaaaaggtcgttcggatggtttcaaagccgttcgtgacgaa
tacttagcatcgtttgccgagggagaagaggtaaacgtaagcttaattaaaacctatttc
cacgacctggagtgggaagcgtcgcgccggttagtgcttgacgagcgtacccgtttagat
ggccggaaactggaccagattcgtcagatctctgccgaagttggctatctgccaggccca
cacggttccgcactgtttacacggggcgaaacgcaatcgctgacaactgttacgcttggt
acaaaaaccgacgaacagattgttgatcaaaccatgtaccaggggtacagcaaattcctg
ttgcactataacttccccggcttttcaacgggcgaagtgaagcctaaccggggtgctggt
cgtcgagaaattggtcacggtaatctggctcaccgatcactgaaaaaagtattgccacct
gccgaagagaacccatacaccattcggattgtatccgacattctggagtcgaacggctca
tcgtcgatggcaacggtttgtgccggtacgatggcgttgatggatgctggtatcaagatc
aaagcacccgtagccgggattgccatgggcttgatttcagatggcgataagtatgccgtt
ctgtcggacatccttggcgacgaagatcaccttggcgatatggatttcaaggttacaggt
acaacaaaaggtatcgtcgcttgccagatggacctgaaagttgatggtttgtcgtatgaa
gtactggcacaggcactggagcaggctcgtttgggccggttgcacatactgggcgaaatg
atgaagggcatcgcagatgttcgttcggacttgaaaccccatgctccccgtgctatggtc
atcaagattgacacaaaccagatcggcgcggttatcgggcccggtggtaaagtggttcag
gatatccagaaagattctggtgctgtcgttaacatcgacgaacatgacaatgcgggttgg
gttagcatctttgccaccagcaaagaaagcatggacaaagccgtatcccgtgtgaaaggc
atcgttgctgtaccggaagttggcgaaacctatgtaggcaaagtgaaaacgattcagccg
tttggtgcattcgttgagttcatgcccggtaaagatggacttttgcacatttccgagatt
aagtgggagcgtctggaaaccatggacggtgtactgcaggtaggggaggaaataacggta
aagttgatcgacgtggacaaaaagaccggaaagtatcgtttatcgcgtaaagttttgctg
ccgaagccggagaacaaaattgcgtaa
DBGET
integrated database retrieval system
