Spirosoma pollinicola: CWM47_15120
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Entry
CWM47_15120 CDS
T05236
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spir03009
]
CWM47_15120 (rimO)
Enzymes [BR:
spir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CWM47_15120 (rimO)
Ribosome biogenesis [BR:
spir03009
]
Prokaryotic type
ribosomal protein modification factors
CWM47_15120 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AUD03050
UniProt:
A0A2K8YZH5
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Position
complement(3628871..3630178)
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AA seq
435 aa
AA seq
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MKTKGVRTNKINIVTLGCSKNLVDSEVLFTQLKGNGMNVTHESKKDDANIVVINTCGFID
NAKEESINTILRYVDAKEAGIVDKVYVTGCLSHRYKDELEVEMPSVDAWFGTNELPRMLK
TLRADYKHELVGERLLTTPAHFAYLKIAEGCDRPCSFCAIPLMRGGHVSRPIEELLTEAR
SLARRGTKELILIAQDLTYYGLDLYKKRNLADLIDQLADVEGIDWIRLQYAYPSGFPLEV
LDVMRDRPNVCNYLDMPLQTGSTELLKLMRRGITREKTESLIHTIRERVPGITLRTTLIT
GHPGETEAMFQETYDFVERMRFDRLGVFTYSHEDDTHSYSMPDDIPADIKQERADELMEV
QQGISQELNQEKVGQTYKVLFDRKEGGYFIGRTEADSPEVDNEVLVSASQYVRLGDFANV
RINKAEEFDLYGEVV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggagtacgtaccaataaaatcaatatcgtcacgcttggttgctcgaag
aacctcgtagattcggaggtgctgtttacgcaactcaagggcaacggcatgaacgtgacg
catgaatcgaaaaaagacgatgctaacattgtcgttatcaatacatgcggcttcatcgac
aacgctaaagaagaatccatcaacacgattctgcggtatgtcgatgccaaggaagcgggt
attgtggataaggtttatgtaacgggttgcctttcgcaccgctacaaagacgaactcgaa
gtggaaatgccttccgttgatgcctggtttggtaccaatgaactgcctcgcatgctgaaa
acgcttcgtgccgattacaagcatgaactcgttggcgagcgtttgttaacaaccccggcg
cattttgcctacctcaaaattgctgaaggttgcgaccggccctgttcgttctgcgcgatt
ccgctcatgcgcggagggcacgtttctcgccccatcgaagagttattgaccgaagcgcgt
tcgctggcccgtcgcggcaccaaagaattgattctgattgcccaggatttaacctactac
gggctcgatctctataaaaaacgcaatctcgccgacctgattgaccaattggccgatgtt
gaaggcattgactggattcgcttacagtatgcctatccatcgggttttccgctggaagtg
ctggacgtgatgcgcgaccggccaaacgtgtgtaattacctggatatgcccctgcaaacc
ggctcgacggagttattgaaactgatgcgtcggggaattacccgcgagaaaaccgaaagc
ttgattcatactattcgtgagcgcgttcccggcatcacgctccgcacgactttgattaca
ggacaccccggcgaaacggaagctatgttccaagagacttacgattttgtggagcggatg
cgcttcgaccgtctgggcgtgtttacgtattcgcacgaagatgatacgcattcatattcg
atgcccgacgatattccagccgacattaaacaggaacgtgccgatgaattgatggaggtt
cagcagggtatttcgcaggagttgaatcaggaaaaagttggtcagacctataaagtgctg
ttcgaccggaaagaaggcggttatttcatcggccgtaccgaagctgactcgcccgaagta
gataatgaagtactggtatctgcttctcagtatgtgaggttaggcgattttgccaatgtt
cgcattaataaagccgaggagtttgatttgtatggagaagttgtctaa
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