Spirosoma pollinicola: CWM47_15220
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Entry
CWM47_15220 CDS
T05236
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_15220
Transporters [BR:
spir02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWM47_15220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_6
TPR_8
TPR_21
TPR_2
BDI_1685-like_C
Motif
Other DBs
NCBI-ProteinID:
AUD03068
UniProt:
A0A2K8YZU8
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Position
complement(3649199..3650734)
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AA seq
511 aa
AA seq
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MKSTFWTTGIVALGLFFGCSTSSLDKVNPNQVITANYYKTSSELLKGVNSVYAVWQSANL
TGREWFFLQDLRSDDVASGGGQLEAPRNQILIGAQNPGNGVAFSVWNGLYRVIHRANVVI
DNGPSVTDNPTLAKRIVGEAKFLRAMAYFDLTTFWGAVPLYTDYVTEVDGTKAKSPVSDI
YTLLTTDLLAIQADLPATATGADLGRATKAAAQALLARVYMQKGDYASAKTQLQAVISSG
LYKLTDEYLDNFIEETEFNSESIFEIGFSKIGDFNWDGDGNDNGANETMTRSQEYSAIGW
RNLIPSDGLLNEYERTAKGDTKTDPRLKFNFYFIGDTYNNGLNTLGESQVQGNTSVVNGV
TQKVSWRKYTAMYKNNETFYTSGINMRLIRYAEVLLMMAETENETGNSANAIALLNQVRA
RKSVAMPAYPTANYPVSSKAEVLRAVMHEKRVEQAGEQIRNRDILRWRAQNKFQTDPLPY
FVKGKQELIPIPQQELDNNSKLSQQDQNPGY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctacattctggaccacgggtattgtggcactggggcttttcttcggatgcagc
accagcagcctcgacaaagtgaaccccaatcaggtcattacagcgaattactataaaacc
tcatcggagttactcaagggagtcaattctgtttatgccgtttggcaaagcgccaacctt
accggccgcgagtggttcttcctgcaagacctccgctccgatgatgtggcttcgggcggg
ggccagttggaagcaccgcgcaaccagattttgattggtgcccaaaatccaggaaacggg
gttgccttctcggtctggaacggcctttatcgggttattcaccgcgccaacgtggtcatt
gataatggtccgtccgttacggataacccgacgctggcaaagcgaattgttggcgaagcc
aaattcctgcgggcaatggcttactttgatctgacaacgttctggggcgcggtcccttta
tataccgactacgtaaccgaagttgatggaacaaaagcaaaatcgccggtcagtgatatt
tacactctgttgacaaccgatttgctggcgattcaggccgatctgcccgctacggctact
ggtgccgacctcggccgggcaacaaaagccgctgctcaggccctgttggcacgtgtttat
atgcaaaaaggggattatgcgagtgcgaagacacaactccaggcagtcattagctcgggc
ttgtacaagctgaccgatgaatacctggataactttattgaagagaccgaatttaattct
gaatcaattttcgagatcggcttctcgaaaattggcgacttcaactgggatggcgacggc
aacgataatggagccaatgaaaccatgacccgcagtcaggagtattcggccattggctgg
cgcaacctgattccgtctgacggattgctcaacgaatacgaacgcaccgccaagggcgat
accaaaacggaccctcgcctaaagttcaatttctatttcatcggcgacacctacaataac
ggcctcaacacccttggcgaatcgcaggtacagggcaacacctccgtcgtaaatggagtg
acgcagaaagttagctggcggaagtatacagccatgtataaaaacaacgaaaccttttac
acgtcgggtatcaatatgcggctaattcggtacgcagaagtgttactcatgatggccgaa
acggagaatgaaaccggcaacagtgccaacgcgattgcgttgctcaatcaggttcgggca
cgaaaaagtgtagccatgcccgcctatccaaccgccaactatccggtcagcagcaaagct
gaagtgttgcgggctgttatgcacgaaaagcgggttgagcaagctggagagcaaattcgc
aaccgggatattctacgctggcgggcacaaaataaattccagacggatcctctcccgtat
ttcgtaaaaggcaaacaggagttaatcccaattccgcaacaggagttggataacaatagc
aaattgtcccagcaggatcagaatccagggtattaa
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