Spirosoma pollinicola: CWM47_15675
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Entry
CWM47_15675 CDS
T05236
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spir
Spirosoma pollinicola
Pathway
spir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CWM47_15675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spir03021
]
CWM47_15675
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_15675
Enzymes [BR:
spir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CWM47_15675
Transcription machinery [BR:
spir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CWM47_15675
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CWM47_15675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Methyltrn_RNA_3
Motif
Other DBs
NCBI-ProteinID:
AUD03148
UniProt:
A0A2K8Z018
LinkDB
All DBs
Position
complement(3751437..3752426)
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKINDMVDNKITVNIKKQSVLKAGDISKFSPS
FEVLNPELEICHIDDTRDLEMEIFVEKGRGYVPSDEPRVNELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETAKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaagtcgtagtggagaaagctgacgacttt
cacggggtgtttgaattcaaaccccttgaaaaaggatacggtgtaacaatcggcaatgcg
ctacggcgtattttgctgtcatctctggaaggatacgctatcacaagcgtgaaatttccg
ggcgtgttgcacgagttttcatctatcgagggcgtcgttgaagacgtgacagagatcatt
ctgaacctgaaaatggttcgcttcaagaagatcaatgacatggtcgacaacaagatcacc
gtcaatatcaagaaacaatcggttcttaaggccggtgatatatccaaattctctccatcg
ttcgaagtgctgaatccagagttggaaatctgccacatcgatgatacacgggatttggaa
atggaaatttttgtggaaaaaggtaggggctacgttccttccgatgaaccacgggttaac
gaattgcctttcggtcacatccctatcgatgctatttacacacctatcaagaatgtgaaa
tatagtgttgagaatactcgggttgagcagaaaactgactatgagcggttactgttagac
atcgaaacagatggatcgattcatcctgaagaagcgttgaaaggcgctgcttatattctg
attcagcactttatgctgttctcagatcagacgatgacgttcgaaacggcgaaaccagaa
gaggaaaatgtagttgatgaagaagtactgcacatgcggaaacttctgaaaacatcactg
gcggatcttgatctgtcggtacgtgcctacaactgcctcaagtcggctgacgttcggacg
ttgggcgatctggttcgattggaaatttccgatatgatgaagttccgcaactttggtaag
aagtcattgacggagcttgagcaactcgttgctgagaagaacctgacgttcggtatggac
gttgccaaatacagactagacgaagattaa
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