Spirosoma pollinicola: CWM47_16020
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Entry
CWM47_16020 CDS
T05236
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spir
Spirosoma pollinicola
Pathway
spir00521
Streptomycin biosynthesis
spir00523
Polyketide sugar unit biosynthesis
spir00525
Acarbose and validamycin biosynthesis
spir00541
Biosynthesis of various nucleotide sugars
spir01100
Metabolic pathways
spir01110
Biosynthesis of secondary metabolites
spir01250
Biosynthesis of nucleotide sugars
Module
spir_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWM47_16020 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWM47_16020 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CWM47_16020 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWM47_16020 (rfbB)
00525 Acarbose and validamycin biosynthesis
CWM47_16020 (rfbB)
Enzymes [BR:
spir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CWM47_16020 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
adh_short
NAD_binding_10
KR
NmrA
DXP_reductoisom
Motif
Other DBs
NCBI-ProteinID:
AUD03208
UniProt:
A0A2K8Z078
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Position
3809202..3810263
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AA seq
353 aa
AA seq
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MKLLITGGAGFIGSHVVRLFVTKYPEYQIYNLDALTYAGNLANLSDIEHLPNYTFIKGDI
TDAKFLEDMFAELELDGVIHLAAESHVDRSITDPMSFVMTNVVGTVNLLNAAKNSWASSA
SGFEGKRFYHVSTDEVFGSLHNPEDFFTEETAYDPQSPYSASKAASDHFVRAYGNTYKLP
VVLSNCSNNYGPNHFPEKLIPLMIHNIQTSKPLPVYGKGENVRDWLFVVDHARAIDAVFH
KGKEGETYNIGGFNEWKNIDIVNLLCQIMDRKLGRPEGTSAQLITYVTDRAGHDLRYAID
AHKIMNELGWEPSLQFEEGLEKTVDWFLSNQTWLDNVTSGAYQSYYQGMYTNR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcttattacaggtggagccgggtttattggctctcatgttgttcggctattc
gttacgaaataccctgaataccagatttataacctcgatgcgctgacgtatgccggtaat
ctggctaacctctcagacattgagcatttacccaattataccttcatcaaaggcgatatt
accgacgcgaagtttttggaggatatgtttgctgagctggaactggatggcgttattcac
ctcgcagccgaatcgcacgttgaccggtccataaccgatcctatgtcatttgtaatgacc
aacgtggttggtacggtaaacttgctgaacgcagccaaaaatagctgggcttccagcgcg
tctggcttcgaagggaaacgattctatcacgtgtcgaccgacgaagtatttggctcgctt
cataatcctgaagatttctttacggaagaaaccgcttacgatccccagtcgccttactca
gcctcgaaagccgcttctgatcactttgtaagggcctacggtaatacctataaattgccg
gttgtgctgtcaaactgctcgaataattacggcccgaatcacttccccgaaaagttgatt
ccgttgatgattcacaatatccagaccagcaagccgctgccagtatatggcaaaggcgag
aacgttcgcgactggctgtttgtggttgatcatgcccgcgctatcgacgcggttttccac
aaaggcaaagaaggcgaaacctacaacattggcggcttcaacgagtggaaaaacattgac
atcgttaacctgctttgtcagatcatggaccgtaaactgggccgaccagagggaacatcg
gctcaactgattacatatgtaaccgaccgggccggtcacgatctgcgctacgccatcgac
gcacataaaataatgaatgaactgggctgggagccatcgcttcagttcgaggaaggtctc
gaaaaaactgtcgattggttcctgtctaatcagacatggctggataacgtcacctctggt
gcctaccagagttattaccagggaatgtacacgaatcggtaa
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