Spirosoma pollinicola: CWM47_16945
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Entry
CWM47_16945 CDS
T05236
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_16945
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_16945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CILP
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
AUD03372
UniProt:
A0A2K8Z0G3
LinkDB
All DBs
Position
complement(4034875..4037904)
Genome browser
AA seq
1009 aa
AA seq
DB search
MQHFYTAPPPLKRLLTACLLAVLALPTSLVSAHSPNASLHKTADIVVKGRVKDALTNETL
TGCTIVIKGSQRGTTTDANGSYSISVPDGNAVLVVGFIGYEKQEIVVGNRSVIDVDLKAE
ASELSQVVVIGYGSAAKKDMTGAVKSLKATDFNKGIINSPEQLLQGKVAGVNVTSASGEP
GGSQSITIRGPGGVRTGSTPLFVLDGLALDNSSTGGGGAINPLNFLNPQDIESIDVLKDA
SATAIYGSRGANGVVLITTKKGKAGVSTLNYSTSYGISTLARALPVFSADEYRQQVPLVG
GVLDDLKGNTDWQKEITRTAFTKNHNISLGGGSEKTTFYGSFGLQNQDGILKGSQMDRYT
GRINISQKLLEDRLTIDANLSASYTNNQRPPIESMLGSAISNNPTYPAYDALGKPAQYQS
ISNPLTSLQLNQDITKITRIVGNISPSFRIIKGLVYKLNFGIDNSSSVRDLQSLPNAVPF
QDGRLETNNAYNNNRLIENYLTYTYAQGDHNLTALAGHSYQKFSLQGRAYSINKFPISDI
LPIYNPGLGQELTLTNNKPTGYATLNELQSFFGRVNYQFKDKYLITATVRADGSSKFGSN
NKYGIFPSFSAGWRLSEEAFLKSSPFSDLKLRAGWGRTGNQEIPSKITQALFTSQVSAAT
SYPLTATGPYPAGTSYSRLSNPDIQWEVSNQTDVGLDFALFNGAISGGIDYFRKVSSNIL
LEVIPADPVQPAGTFWTNVPNMTITNKGLELELMYHYTAKSGFRFDVGGNMTFINNIVNN
SPYSVIPSGSASGSGLTSATINGYLNGQPIGTFFLKEFTGFDDKGLSTYRDADGDGLITD
KDRVAAGSALPTKQFNFNTNASFKGFDLSANFNGVSGNKLYDNTANSNFYKLRLSKGINT
TPEAVANANESVNNAAPVSTRYLKNGSFFRLNNVALGYNFNTKALGIKRWVSGLRVSVTG
QNLFVITKYNGYDPEVNSDRQINGISSYGIDYLSYPKARSVVFGLNLTL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttttacacagctcctcctccgctaaaacgtctccttacggcctgtttactg
gcggttttagccttaccaacttcactggtttctgcccacagcccgaacgcatcgctgcat
aaaacagccgacatcgttgtgaaagggcgcgtaaaagacgcgctgacaaacgaaacactg
acgggctgcaccattgtcattaaaggaagtcagcgcggcacgacgaccgatgccaacggt
agttactccatctccgtaccagacggaaatgctgttctggttgttggatttattggctac
gaaaagcaggaaatcgtggtgggcaaccgctcggttattgatgtagacctgaaggccgaa
gcctccgaactatcgcaggtagttgttattggctacggtagtgccgccaagaaagacatg
accggcgcggttaaatccctgaaagcgactgactttaacaagggaatcatcaactcaccg
gagcagcttttgcagggcaaagtagccggggttaacgttacctctgccagtggtgagccc
ggtggtagccagtcgatcaccattcgcggaccgggtggcgttcgtaccgggagcactcct
ctttttgtactcgacggactcgcgctggacaattcgagtacgggcgggggtggggccatc
aatcccctgaactttctaaatccgcaggacatcgagtcgattgacgtgctgaaagatgca
tcggcaacagctatttatggttctcgtggtgcaaacggtgttgtcctgatcacgacgaag
aagggcaaagcgggtgtttcaaccctcaactattcaaccagttacggcatctctaccctg
gcacgggccttgcctgtgttctcggccgatgagtaccggcaacaggtgccactcgttggg
ggtgttctcgatgatttaaagggcaataccgattggcaaaaggagattacccgaacggcg
tttaccaaaaatcataatatatcgctgggtggtggttccgaaaaaacaactttctacggc
tcatttggcctgcaaaatcaagatggcattttgaagggcagccagatggatcgctacacg
gggcgcatcaatatatcgcagaaattgctggaagaccggcttacgattgatgctaacctc
agcgcgtcgtatacgaacaatcagcggccgcctatcgagagtatgctagggagtgccatt
tcgaacaacccgacctatccggcttacgatgcccttggcaaaccggctcagtatcaatcg
atttcaaacccgctaaccagcctccagttaaatcaggacatcaccaaaatcacccggatt
gtcggcaacatatcgccttctttccggatcataaaaggactggtttataagcttaatttc
ggtatcgacaattcgagttcggtacgcgatctgcaatcgctgccgaatgcggtgcccttt
caggatggccggttagaaacgaataatgcgtataacaacaaccggttgatcgagaactac
ctgacctacacctacgcacagggcgaccacaacctgaccgcgttggccggacattcctac
cagaagttttcactacaggggcgggcgtatagcatcaacaagttccctatttcagacatt
ctgccaatctataaccccggcctgggccaggagctgacgctgacgaataacaagccaacg
ggctatgcaacactcaacgaactgcaatcgttttttggccgcgtcaattaccagttcaag
gataaatacctgatcacggctacggttcgggccgatggttcctcgaagtttgggtcgaac
aacaagtacggtattttcccatcgttctcggcgggctggcgtttatcggaagaagccttt
ctgaaatcatcgccgttcagcgatttgaaacttcgcgcgggctggggccggacaggcaac
caggagataccttcaaaaatcacacaggctctgttcacttcgcaggtatcggccgcaacc
agctatccgctcacggctacgggcccttacccggctggtacgtcttattcacggctatca
aaccccgacattcaatgggaggtatcaaaccagaccgacgtaggacttgattttgcgctg
ttcaacggggctatttccggcggaatcgactatttcagaaaagtgtccagcaatatcctg
ctcgaagtaattcctgccgatcccgttcagccagcgggtacgttctggaccaatgtgccg
aacatgacgattaccaacaaagggcttgaactggaactgatgtaccactacacggcgaaa
agtggtttccgcttcgatgtgggtggcaacatgacgtttatcaacaacatcgtgaataac
tccccttattcagtgattccgtcgggttcagcgtcgggctcgggtctgacgtcggcaacg
atcaatggctatttgaacggtcaacccattggtacattcttcctgaaagagttcaccggc
ttcgacgacaagggcttaagcacctaccgcgatgctgatggcgatggcctgataaccgac
aaagaccgggttgcggctggcagtgcgttgccaacgaagcagtttaacttcaacacgaat
gcgtcgttcaaaggctttgacttatccgccaatttcaacggtgtgtctggcaacaaactg
tacgacaacacggccaactccaacttctacaagctgcggctgtcgaaaggaatcaacacc
acacccgaggccgtggcaaacgccaatgagtcggtcaacaacgcagcaccggtatcgacg
cgctatctaaaaaacggctcgttcttccggctgaataacgtggcactgggctataatttc
aatacgaaagcattaggcatcaaacgctgggtgtcgggcttacgggtgtccgttacgggt
cagaatctgttcgtgatcacgaaatacaatggctatgatccggaagtaaactccgaccga
caaatcaatggtatttcgtcgtatggcattgattacctgagctatccgaaagcaagatct
gtcgtatttggtttgaacctgacactctaa
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