Spirosoma pollinicola: CWM47_18345
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Entry
CWM47_18345 CDS
T05236
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spir03000
]
CWM47_18345
Transcription factors [BR:
spir03000
]
Prokaryotic type
Helix-turn-helix
Other families
CWM47_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA
HTH_8
Mg_chelatase
AAA_16
MCM
AAA_2
AAA_3
nSTAND3
IstB_IS21
AmiR_N
AAA_19
cREC_REC
DUF815
AAA_7
HALZ
Motif
Other DBs
NCBI-ProteinID:
AUD07368
UniProt:
A0A2K8ZBV8
LinkDB
All DBs
Position
complement(4357050..4359068)
Genome browser
AA seq
672 aa
AA seq
DB search
MLIVEDEYIIANDLELILQEAGYPVIGIADSMTEALMLMDQQKPDIVLLDIYLKGKETGI
DLAKQLEGMGIPFIYISANDNRSVLEAVKATQPIGYIVKPFREQDLLTVLEISRYRYAHS
VEMKLREEKALQIALTDALSASGSWEQKLLKAAMVLQAHVPFDFLSIQHRKGNDVHRFNY
YRVGFEEYQTISLVDIQQMTSTTVDQLLQLEPGPIPTGLERYDGDTFATFCKQNRFVQML
ATTFRLESALVMPLGVGPVDTFCITFLSRKGDSYLSRHLSLLERLEQPIVLMLERALAFD
EVARLSEQLKRENNYLQEEVKTLANFEEIIGRSPRLLRVFEQVTQVATTDTTVLILGESG
TGKELIARAVHNLSARKGKILVKINCATLPAALIESELFGHEKGSFTGAFEKRIGKFELA
HGGTIFLDEIGEMPLELQAKLLRVLQEKEIERIGGKTPIKTDVRIMAATNRHLEKEVAEG
RFRMDLYYRLATFPILLPSLRERPGDIPLLAQFFARKAARKLGKPFRGISETVLSELINY
TWPGNIRELENVIEQAVIINDGQSPLRLGRPLENNFFAMTTPGPMSQPDAGFNRYGQPAS
AKPRDMGDVKQIQQETEREYILAVLKQTNGRIRGTGGAAELLNLKPTTLEYRMEKLGIRK
VLSMQSPTSSND
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
attttaattgttgaagatgaatacattatcgccaatgacctggaactcatcctgcaggaa
gcaggctacccggttattggtattgccgactccatgaccgaagcgctcatgcttatggat
caacaaaaaccggatatcgttttactcgatatttacctgaagggcaaagaaaccggcatt
gatctggccaagcagctggaaggtatgggtattccctttatttatatatctgccaacgac
aacagaagcgtattggaagccgtaaaggcgactcagcccattgggtacattgtcaaacct
ttccgggaacaagatctccttacggtgctggaaatcagccggtaccgctatgcgcacagt
gttgaaatgaagctccgtgaagaaaaggcacttcaaattgccttaacggatgcgctgtcg
gcttcgggaagctgggaacaaaaactgctgaaagcagcgatggttcttcaggcgcatgtg
cccttcgatttcctgtcgattcaacatcgaaaaggcaacgacgttcatcggtttaattac
tatcgggttggctttgaggagtatcaaaccattagtctggtggatatccagcagatgacc
agcacaaccgtcgatcaactgcttcagctggagcccggtccgataccaaccggtcttgaa
cgctacgatggagatacctttgctacgttctgcaaacagaatcggtttgttcagatgctc
gcgacaacattccggcttgagtcggcattggtcatgcctcttggcgtaggacccgttgat
acgttctgcattaccttcctgagtcgtaaaggcgattcgtacctttcccggcacctgagt
ttactggagcgattggaacagcccattgtattgatgctggagcgggcacttgccttcgat
gaggttgcccggctcagcgaacagctgaaacgggagaataactaccttcaggaagaggta
aaaacattagcgaatttcgaagaaatcattggccgaagtccgcgcctgttacgggttttt
gagcaggttactcaggtagctacaaccgacacgacggtacttatacttggcgaaagcggg
accggaaaagaactcatcgcgcgggcggtccataacctgtcagcacgcaaaggcaaaatt
ctggtaaagatcaactgtgccacgctaccggctgcactcattgaatcggaactgtttgga
cacgaaaaagggtcgttcacgggtgccttcgaaaagcggatcggcaagtttgagttagca
catgggggtaccatttttttggatgagatcggggaaatgccgctcgaattacaggctaaa
ttactgcgcgtactacaggagaaagagatcgaacgaattgggggcaaaacgcccatcaaa
accgacgtgcgcatcatggctgccaccaaccggcatctggaaaaagaagtcgccgaggga
cgcttccggatggacctgtattatcgactggctacgtttcccatcctcctaccctcccta
cgggaacgaccgggcgacataccgctgctggcccagtttttcgcccggaaagcggcccgg
aaacttggtaaaccgtttcggggaatcagtgaaacggtactcagtgaactgatcaattac
acctggccgggtaacattcgggaactggaaaacgtcattgagcaggccgtcatcatcaac
gacggtcaatcgccactcaggctgggtcgacccttggagaacaacttttttgccatgaca
acgcccggccccatgagtcaaccagatgctggttttaaccggtacgggcaaccggcttcg
gcaaagcccagagatatgggggatgttaaacagattcagcaggaaaccgaacgggaatat
atcctggcggtccttaaacagacaaatggccgtatccgggggactggcggggcggctgaa
ttattgaacctgaaaccaacaacactcgaatatcgcatggaaaaactgggtatcagaaag
gtactttccatgcagtcaccaacttcgtcaaatgactaa
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