Spirosoma pollinicola: CWM47_21285
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Entry
CWM47_21285 CDS
T05236
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spir03032
]
CWM47_21285 (topA)
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_21285 (topA)
Enzymes [BR:
spir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWM47_21285 (topA)
DNA replication proteins [BR:
spir03032
]
Prokaryotic type
DNA Topoisomerases
CWM47_21285 (topA)
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWM47_21285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
IcmF_helical
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUD04143
UniProt:
A0A2K8Z2P1
LinkDB
All DBs
Position
complement(5053513..5055705)
Genome browser
AA seq
730 aa
AA seq
DB search
MAKHLLIVESPNKKQKLLQYLDDLYGSGQWYVAASVGHVQDLPEKELGINRERNYSMSYQ
VSRDKEKVVTGLKNLVREVGADNVILATDPDREGEAISWHLSRLLNISPDKAQRATFQEI
TKSAIKSALDSRRPINMSLVKAQEARRAIDRIAGYEVSDIARRKTGKNLTAGRVQSVALK
LIVEREKTISSFTDQFSFKLTAVFTSPKNEFIKANYVGAGEADSQKMNALPILQAYLNSA
TGKLWRLLDKQSKPVLRQPGPAFTTSSLQQEAIRKLSKGNDRWGAKRVMEVAQALFAAGH
ITYMRTDSPNLSLEAVEAIQEQVISQFGETYFQPRRFPVKADAQEAHEAIRPTHMDVRMA
GTNGDEQSLYRLIYTRAMASQMKPTQYEETILTIGTGQPIDTFQAKASTLIFEGYRAVYT
ESDEEEASEDESVISPVAVGTTLRLDQMQGKQTYRQPPKRFDEATLIKSMEQKGIGRPST
YASILSTIQKRNYAETGNVAARKLPTTIITLKQGTIRTTTEQQSVGGDKAKLVPTATGIQ
LADFLEANFSPLIDYGFTAGMEKQLDEIVEGKSKFLTVIQSYDQMHQRMIAHVEATLSDA
KRETATRLLGEYKNKPVRVGTSKQGTYLLYADAFTGVESLAADEVTLELAIPMLESSSSA
PAAKGLTIIHKAGKYEVRKGQFGYYLTDGVTNAKLPKQFATESQMKTIKAADAQTIIKAY
LEWKRKATNK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcatctgctcattgttgagtcaccaaataaaaagcaaaaattacttcaatat
ctcgatgatttatatggtagcggccagtggtacgtagcggccagtgtaggtcacgttcag
gatctgccggaaaaggaattaggcataaaccgggagcgcaattacagcatgtcataccag
gtaagccgggataaggaaaaagtcgttactggcctaaagaacctggtccgggaggtgggt
gctgataatgtgattttagccactgaccctgatcgggaaggcgaagccatttcatggcat
ttgagccggttgctcaacatatcaccagacaaggcacaacgagccacctttcaggagatt
accaaatcagctattaaatcagcgctggatagccgacggccaattaatatgagcctggtc
aaagcccaggaagcccggcgggccatcgacaggattgccggctacgaagtttcggatatc
gcccggcgcaaaacaggtaaaaacttaacggcaggccgggtgcagagtgttgcattaaag
ctaattgtggagcgggagaaaacgatctcttcctttacagatcagttcagctttaagctc
acggctgtttttacgagccccaaaaatgagtttatcaaagccaattacgtaggggcgggg
gaagcggacagccaaaaaatgaatgcactgcctattttacaggcttatctaaatagtgcc
accggcaagttgtggcgcttgctggataaacaaagcaagccggtactgcggcagcctggc
ccggctttcacaacctcctctctgcagcaggaagccattcgcaaactatccaaaggaaat
gaccgatggggggcaaaacgggttatggaggttgctcaggcgttattcgcagctggtcat
attacgtatatgcgtactgattcacccaacctatccctggaagcggtcgaggcaattcaa
gagcaggtcattagccaattcggagaaacctattttcagccccggcgctttcccgtcaaa
gcggatgcccaggaagcccacgaagcgatccgaccaactcatatggatgttcgaatggcg
gggactaacggggatgaacaatccttgtataggctcatctacacgcgggccatggcgtca
caaatgaaaccaacccagtacgaggagacaatactaacgatcggcaccgggcagcccatt
gatacctttcaggcaaaagccagtaccttaatttttgagggttaccgcgctgtctatacg
gagtctgatgaggaggaggcaagtgaggacgagtccgttatttcgcccgtagcggttggt
acaacgctgcgcctcgatcaaatgcagggtaaacaaacctaccgacagccccctaagcga
tttgatgaagcaacactgattaaaagtatggaacagaaagggattggacgaccatctacc
tacgctagtatcctatcgacgattcaaaagcggaattatgcagaaactggcaatgtagct
gcccgaaaattgccgacaaccatcattacgctgaaacaggggacgattcgtaccacgacc
gaacaacaatccgttgggggcgataaagcaaaactggtccccacggctacgggtattcaa
ttagccgattttcttgaagcgaatttctccccattaattgactacggatttacggcaggc
atggagaaacaacttgacgaaatagtcgaaggcaaaagcaaatttctgactgttattcag
agctatgatcaaatgcatcagcgaatgattgctcacgtggaagcgacgctatctgatgcc
aagcgggaaacggctactcgattactgggggagtataagaataaacccgttcgggtcggt
acctcaaaacagggaacgtaccttttatatgccgatgcgtttacgggggtcgagtcgcta
gccgccgatgaggtaacgctggagcttgctattccaatgttagaatcaagttcttcggca
ccggctgctaaaggacttacaatcattcacaaagccggaaaatacgaagtcaggaaaggg
cagtttgggtactacctaacggatggggttacgaacgctaaactgcctaagcagtttgct
acggaaagccagatgaaaacgattaaggccgctgatgcacagactatcataaaagcctat
ctggaatggaaaaggaaagccactaacaagtag
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