Spirosoma pollinicola: CWM47_22615
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Entry
CWM47_22615 CDS
T05236
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
spir
Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_22615
Transporters [BR:
spir02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CWM47_22615
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AUD04388
UniProt:
A0A2K8Z3E4
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Position
5385230..5386987
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AA seq
585 aa
AA seq
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MKTSIIKGTLMASMLALVTFACNDKFLQVPATGQLASDQLTSRAALDGLLISAYSQLNGR
GYDQSAASLDWVRGDMSGGDANKGSNSGDFNALTPFQTYVSLNATNAEVNFKWRALYEGI
SRANMVLRLIPSAASDVTDADKKRISGEARFLRGHYYFMLKRQFNMVPYVDETVDYGTGV
DKVPNTEDIWAKIEADFQFAQTNLPATQSASGRANSWAAASYLAKTYLYEKKYALAKALF
DQIIASGTTASGVKYALVANYTDIFNAAKETNSESIFADQAAANTGSADNANPNLNLNFP
YNTGSAGPAGCCGFFPPTFEMANSFRVNANGLPLLDGSYNSSANELVTDMGLASSAAFTP
DAGPVDPRLDWSVGRRGLPYLDWSVHPGQDWIRDQTFAGPYSPKKFVFYKSQDKTLTDGS
SWTDGYSAINYNFIRYADVLLMAAECEVEVGSLATSLNYVNLVRNRSANSAFWVKTAAGA
NAANYKIAPYTAFADQATARTAIQFERKLELSGEGHRFFDLVRWGVAAPVLNAFIAYESK
KLPVAYAGAKFTAGRDEYLPIPQTQIDYQATDASGKKILTQNPGY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcgattataaagggtacgctcatggccagtatgctcgcgctggttacgttc
gcctgcaacgacaaatttctgcaagtaccggctacgggtcagttggcgagtgaccaatta
acatcacgagccgcgctggatgggctgttgatttcagcttactctcaattaaatggccgg
ggctacgaccagtcggcggcttctttggattgggtacggggcgatatgtcggggggggat
gctaacaaaggctctaactccggtgactttaatgccctgacaccttttcaaacctatgtg
tcattgaacgcgacgaatgccgaggttaactttaaatggcgggcattgtatgaaggcatt
agccgggccaatatggtgcttcgactaatacccagtgcggcatcggatgttacggatgcc
gacaagaagcgcatctcgggcgaagctcgttttctgcgggggcattattatttcatgcta
aaacgccagtttaacatggttccttatgttgacgaaactgtcgactacggtacgggcgtt
gataaagttcctaacacagaagatatctgggctaaaattgaggctgatttccaatttgcg
caaacgaatcttcctgctacgcaatcggcttccggccgggcgaatagctgggcggcagca
tcttatttagccaagacatacttgtatgaaaaaaagtatgcactggctaaagcgttgttt
gaccagattattgccagcggaacaacggcgtcaggggttaaatatgcactggttgccaat
tacaccgatatttttaatgcggccaaggaaaccaattcggaatctatttttgccgatcag
gctgctgccaacacgggtagcgcagataatgctaacccaaacctgaacctgaacttccct
tataatacgggttcagcaggtccggcaggttgctgcggatttttcccgcctaccttcgaa
atggccaactcgtttcgggtaaatgccaatgggttgcctttactggatggctcgtataat
tcgtcggctaatgagttagtgaccgatatgggcctagcctccagtgcagctttcacacct
gatgcaggcccggttgatccacgattggattggtcagttggtcgtcggggtcttccttat
ttggattggtcggttcacccaggtcaggactggattcgtgaccagacatttgcgggtcct
tattcacctaaaaagttcgttttttacaaatcgcaggataaaacgctgaccgatggtagt
tcctggacggatggatactcggctattaactacaactttattcgttatgccgatgtactg
ctgatggctgccgaatgtgaagttgaagtaggtagcttagccacatcgctgaactatgtt
aacctggtgcgtaatcgctctgcaaattctgctttctgggtgaaaacagctgccggtgct
aatgcagctaactacaaaattgccccttacacggcttttgctgatcaggcaactgcccgg
acagcgattcagtttgagcgtaaactggaactatcgggcgaaggccaccggttctttgac
cttgttcgttggggtgtagccgctccggtgctgaatgcgtttatcgcctacgaaagcaaa
aaactacccgtagcctatgccggtgctaaattcaccgcaggtcgggatgaatacctgccg
attccacaaacgcagattgattaccaggctacagacgccagcggtaagaaaatcctgact
cagaatccaggttattaa
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