Spirosoma pollinicola: CWM47_25195
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Entry
CWM47_25195 CDS
T05236
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spir
Spirosoma pollinicola
Pathway
spir03410
Base excision repair
spir03430
Mismatch repair
spir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWM47_25195 (recJ)
03430 Mismatch repair
CWM47_25195 (recJ)
03440 Homologous recombination
CWM47_25195 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_25195 (recJ)
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CWM47_25195 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CWM47_25195 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWM47_25195 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AUD04847
UniProt:
A0A2K8Z4M2
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All DBs
Position
6001811..6003571
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AA seq
586 aa
AA seq
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MIAQPPPPSKRWITRSFPNSKEQQGAIETLTNSLGVSPFLSALLVQRGVQTYEEARTFFR
PEIGHLHNPFEMKDMNKAITRLQMAMLPERQEKILIYGDYDVDGTTSVALVYSFLKNYHT
AIDFYIPDRYKEGYGISSQGIQWAADNGFSLIIALDCGIKSIERVAEAKALGVDFIICDH
HRPGDIVPDAAAVLDPKQEDCLYPYKELSGCGVGFKLMHAFCLHKSIPLDELYPLLDLVA
VSIASDIVPITGENRVLAYYGLKQINASPRTGLKALIKIAGFSLGRELDITNLVFGLGPR
INAAGRIQHAKAAVQLLLAESEEEADEFAMAINKHNNSRREFDSSITDQALAMIRENESL
IHAKSTVLYDATWHKGVIGIVASRCIEHFHRPTIILTQSNDKAAGSARSVPGFDVYEAIE
ECADLLEQFGGHTFAAGMTMAVSNIEAFQKKFEEVVARSIKEEHLTPLIDIDLPLDFSEI
NDKLYRIVRQMGPFGPHNLQPTFMTEDVYLVSEPIIMKEKHLKLNVRQVDKASGRASQTL
TAIGFGFAHIADQLRSGKPFSICYQVEQNHYNGNTTLQLMLKDVKV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatagcccaaccgccccctccgtcaaaacgctggattaccagatcctttcctaattct
aaggaacaacagggggctattgaaacattaaccaattcgctcggcgttagtcctttctta
tcggctttgctggtgcagcgaggtgtgcaaacctacgaagaagcacggacgttctttcgt
cctgaaattggtcatcttcacaatccttttgaaatgaaggatatgaataaggccattaca
cgcctgcaaatggccatgcttccagaacggcaggaaaaaattctgatctacggcgattat
gatgtggatggtaccacctcggtggcgctggtctatagttttctgaaaaattaccatacg
gccattgatttttatattcctgaccgctacaaagaaggctatggtatctcgagtcagggt
atacaatgggccgccgataatgggttttccctaatcatcgcactcgactgtggcataaaa
tccattgagcgcgtggccgaagccaaagccctgggtgttgattttatcatttgcgatcac
caccgccccggcgatatagttccagatgccgctgccgtgcttgatcccaaacaggaagat
tgcttatatccatataaagagctgagcggctgtggcgtaggctttaagctcatgcacgcc
ttttgtctgcacaagagcattccgttggatgagctatatccgctcctcgatctggttgct
gtcagtattgcctccgacattgtgcccattaccggcgaaaaccgggtgttggcctactat
ggcttgaaacaaattaatgcgtcgccccgcaccggtctgaaagcattgattaaaatagcc
ggtttttcgctcggccgcgagctggatattacaaacctggtgtttggtctggggccacga
atcaatgccgccggacggattcaacatgccaaagccgccgtacaactcctactggctgaa
tcggaagaagaggccgacgaatttgcgatggcgattaacaagcataacaacagccgacgt
gagtttgatagcagcatcaccgatcaggcgctggcgatgattcgggaaaacgaaagtctg
attcatgctaaaagcacggtgctgtacgatgccacttggcacaaaggcgtcattggtatt
gtagcctcgcggtgtatcgaacattttcaccggccaactatcatcctgacgcagtcgaac
gataaggctgccgggtcggcgcggtcggtgccgggtttcgatgtgtatgaggcaattgaa
gagtgtgccgatttactcgaacagtttggtggacatacattcgcggctggtatgactatg
gccgtgtccaatatcgaggcttttcagaaaaagtttgaagaagtcgtcgcgcggagtata
aaagaagaacacctgacgcccctgattgatattgatttaccactggattttagtgagatc
aacgataaattgtatcgaattgtgcggcaaatggggccattcgggccacataatttacaa
cccacgtttatgaccgaggatgtatacctcgttagcgagccgatcatcatgaaggagaaa
cacctgaagctgaatgtacggcaagtggataaagcatccggtcgggcaagtcagacctta
acggccatcggctttgggtttgctcatatcgctgaccagctacggtccggtaaacccttc
tccatttgttatcaggtcgagcaaaatcactacaatggcaataccacgttgcagttgatg
cttaaagatgtgaaggtgtaa
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